ncRNA ID | novel_zma_miR14501 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:14853703-14853906 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089702 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUAGAAGAUGUUUGUAGUCCCUU - 24 |
Stem-loop(if miRNA) |
--AG     G                        C          C              C                    C              U   UG     UAGAA AUGUUUGUAGUCCCUUUUUUGCGA GUAAAUCUUU GGAUGGCAAUAUUG GAAGCGCUAUGUUUAGAGUC CAAAUAUACAAUUA CUU  U     ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |||     AUCUU UAUAAACAUCAGGGAAAAAACGCU CAUUUAGAAA CCUACCGUUAUAAC CUUUGUGAUACAAAUCUCAG GUUUAUAUGUUAAU GAG  C GUUA     G                        U          A              A                    A              C   UC |
Stem-loop sequence | AGUAGAAGAUGUUUGUAGUCCCUUUUUUGCGACGUAAAUCUUUCGGAUGGCAAUAUUGCGAAGCGCUAUGUUUAGAGUCCCAAAUAUACAAUUAUCUUUGUCCUGAGCUAAUUGUAUAUUUGAGACUCUAAACAUAGUGUUUCACAAUAUUGCCAUCCAAAAGAUUUACUUCGCAAAAAAGGGACUACAAAUAUGUUCUAAUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008656417.2 |
|
2.5 | PREDICTED: Zea mays UDP-glycosyltransferase 74B1 (LOC100274322), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
EU941959.1 |
|
2.5 | Zea mays clone 1472937 mRNA sequence | NA | coding protein | psRNATarget |