ncRNA ID | novel_zma_miR14489 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:288423372-288423485 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089702 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAAGCUAGAACGACUUAUAA - 21 |
Stem-loop(if miRNA) |
--     A             G   A     A      UAA A     A    C      GUAAG CGUUCUGGCUUUU UAG UACAU GUUUUU   U UGUAU UAGA AUAA   ||||| ||||||||||||| ||| ||||| ||||||   | ||||| |||| |||U   UAUUC GCAAGAUCGAAAA AUC AUGUA CGAAAA   A GCGUG AUCU UAUG AA     A             G   C     C      -CG C     A    A    |
Stem-loop sequence | GUAAGACGUUCUGGCUUUUGUAGAUACAUAGUUUUUUAAUAUGUAUAUAGACAUAAUGUAUAUCUAAGUGCGCAGCAAAAGCCAUGUACCUAGAAAAGCUAGAACGACUUAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020550191.1 |
|
0.0 | PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK1 (LOC103649993), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020546942.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109943549 (LOC109943549), mRNA | NA | coding protein | psRNATarget |