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BaseInfo

ncRNA ID	novel_zma_miR14486
Species	Zea mays
Class	miRNA
Genome position	Chr3:197784119-197784238 [-]
Reference genome	RefGen_v4
Source	SRR1583941
Length	21
Mature sequence(if miRNA)	100 - GUUUGGAAGCAAGGGGAAUGA - 120
Stem-loop(if miRNA)	--     GA   A         A  U     A      C       G    CC      A   GUUUG  AGC AGGGGAAUG AG GGAUU GAGGGG UAAAAUC CCUU  UAUUCA U   |||||  ||| ||||||||| || ||||| |||||| ||||||| ||||  ||||||   CAAAC  UCG UUCCCUUAC UC CUUAA CUCCCC AUUUUAG GGAA  AUAAGU U AA     UC   G         C  C     C      A       G    CA      U
Stem-loop sequence	GUUUGGAAGCAAGGGGAAUGAAGUGGAUUAGAGGGGCUAAAAUCGCCUUCCUAUUCAAUUUUGAAUAACAAGGGGAUUUUAACCCCUCCAAUUCCCUCCAUUCCCUUGGCUCUCAAACAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT061256.1	ncRNA:21   AG-UAAGGGGAACGAAGGUUUG   1   ||-|||||*||||||||||||| targets:1898   UCUAUUCCACUUGCUUCCAAAC   1919 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0127C16 mRNA, complete cds	NA	coding protein	psRNATarget
EU945351.1	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   *||||=||||||||*|||||| targets:433   CCAUUUCCCUUGCUGCCAAAC   453 Target Full Sequence	2.5	Zea mays clone 260481 mRNA sequence	NA	coding protein	psRNATarget
XM_008672161.2	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   *||||=||||||||*|||||| targets:1285   CCAUUUCCCUUGCUGCCAAAC   1305 Target Full Sequence	2.5	PREDICTED: Zea mays TVP38/TMEM64 family membrane protein YtxB (LOC103647660), mRNA	NA	coding protein	psRNATarget
XM_008654031.2	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   *||||*|=||||||||||||| targets:1690   CCAUUACUCUUGCUUCCAAAC   1710 Target Full Sequence	2.0	PREDICTED: Zea mays peroxidase 2 (LOC103632211), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547641.1	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   *||*|||=||||||||||||= targets:3328   CCAAUCCUCUUGCUUCCAAAU   3348 Target Full Sequence	3.0	PREDICTED: Zea mays U11/U12 small nuclear ribonucleoprotein 48 kDa protein (LOC100279189), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT035317.1	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   |||*|=*|||||||||||||| targets:646   UCAAUUGCCUUGCUUCCAAAC   666 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0054P02 mRNA, complete cds	NA	coding protein	psRNATarget
BT042276.1	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   |||*|=*|||||||||||||| targets:656   UCAAUUGCCUUGCUUCCAAAC   676 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0187F06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645432.2	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   |||*|=*|||||||||||||| targets:901   UCAAUUGCCUUGCUUCCAAAC   921 Target Full Sequence	3.0	PREDICTED: Zea mays Ubiquitin-conjugating enzyme E2 variant 1A (umc107b(croc)), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645431.2	ncRNA:21   AGUAAGGGGAACGAAGGUUUG   1   |||*|=*|||||||||||||| targets:903   UCAAUUGCCUUGCUUCCAAAC   923 Target Full Sequence	3.0	PREDICTED: Zea mays Ubiquitin-conjugating enzyme E2 variant 1A (umc107b(croc)), transcript variant X1, mRNA	NA	coding protein	psRNATarget