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BaseInfo

ncRNA ID	novel_zma_miR14483
Species	Zea mays
Class	miRNA
Genome position	Chr9:70018098-70018149 [+]
Reference genome	RefGen_v4
Source	SRR2089702
Length	24
Mature sequence(if miRNA)	1 - UCCAGCAGCGUACUCUAAACGGUC - 24
Stem-loop(if miRNA)	--           A       --C  U   UCCAGCAGCGU CUCUAAA   GG C   ||||||||||| |||||||   ||   AGGUCGUCGCA GAGAUUU   UC C UU           G       AAA  U
Stem-loop sequence	UCCAGCAGCGUACUCUAAACGGUCCUCUAAAUUUAGAGGACGCUGCUGGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008677400.2	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   |||=||||||||*||||||||||| targets:5301   GACUGUUUAGAGGACGCUGCUGGA   5324 Target Full Sequence	1.5	PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g65560-like (LOC103651695), mRNA	NA	coding protein	psRNATarget
HI405981.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:37   CUAAAUUUAGAGAACGCUGCUGGA   60 Target Full Sequence	1.5	Sequence 4106 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238111.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:37   CUAAAUUUAGAGAACGCUGCUGGA   60 Target Full Sequence	1.5	Sequence 4106 from Patent EP2985353	NA	coding protein	psRNATarget
JB166442.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:37   CUAAAUUUAGAGAACGCUGCUGGA   60 Target Full Sequence	1.5	Sequence 4106 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238109.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:37   CUAAAUUUAGAGAACGCUGCUGGA   60 Target Full Sequence	1.5	Sequence 4104 from Patent EP2985353	NA	coding protein	psRNATarget
JB166440.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:37   CUAAAUUUAGAGAACGCUGCUGGA   60 Target Full Sequence	1.5	Sequence 4104 from Patent EP2559767	NA	coding protein	psRNATarget
HI405979.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:37   CUAAAUUUAGAGAACGCUGCUGGA   60 Target Full Sequence	1.5	Sequence 4104 from Patent EP2074227	NA	coding protein	psRNATarget
HI405852.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:38   CUAAAUUUAGAGAACGCUGCUGGA   61 Target Full Sequence	1.5	Sequence 3977 from Patent EP2074227	NA	coding protein	psRNATarget
JB166313.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:38   CUAAAUUUAGAGAACGCUGCUGGA   61 Target Full Sequence	1.5	Sequence 3977 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237982.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:38   CUAAAUUUAGAGAACGCUGCUGGA   61 Target Full Sequence	1.5	Sequence 3977 from Patent EP2985353	NA	coding protein	psRNATarget
NM_001152204.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:840   CUAAAUUUAGAGAACGCUGCUGGA   863 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279180 (LOC100279180), mRNA	NA	coding protein	psRNATarget
EU977130.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:840   CUAAAUUUAGAGAACGCUGCUGGA   863 Target Full Sequence	1.5	Zea mays clone 999810 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU945316.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   *****|||||||*||||||||||| targets:1343   CUAAAUUUAGAGAACGCUGCUGGA   1366 Target Full Sequence	1.5	Zea mays clone 257973 mRNA sequence	NA	coding protein	psRNATarget
NM_001165864.2	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   **=|*|||||=|*||||||||||| targets:75   AUUCAUUUAGGGGACGCUGCUGGA   98 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304430 (LOC100304430), mRNA	NA	coding protein	psRNATarget
XM_020553398.1	ncRNA:24   CUGGCAAAUCUCAUGCGACGACCU   1   ***=*|||||||*||||||||||| targets:1764   CUAUAUUUAGAGGACGCUGCUGGA   1787 Target Full Sequence	1.5	PREDICTED: Zea mays transmembrane 9 superfamily protein member 4 (LOC100285157), transcript variant X1, mRNA	NA	coding protein	psRNATarget