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BaseInfo

ncRNA ID	novel_zma_miR14475
Species	Zea mays
Class	miRNA
Genome position	Chr8:145548973-145549089 [+]
Reference genome	RefGen_v4
Source	SRR2089702
Length	24
Mature sequence(if miRNA)	94 - AACACGACUAAGGGUAUAGAUGAG - 117
Stem-loop(if miRNA)	--                                             --     - UC U   CAUCUAUACCCUUAGUCGUGUUUUUUGCUCAGCUAUACCCUUCCA  GCUAU G  C U   |||||||||||||||||||||||||||||||||||||||||||||  ||||| |  |   GUAGAUAUGGGAAUCAGCACAAAAAACGAGUCGAUAUGGGAAGGU  CGAUA C  G C GA                                             CA     U UU U
Stem-loop sequence	CAUCUAUACCCUUAGUCGUGUUUUUUGCUCAGCUAUACCCUUCCAGCUAUGUCCUUCUGUUCUAUAGCACUGGAAGGGUAUAGCUGAGCAAAAAACACGACUAAGGGUAUAGAUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001138790.2	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||||||||||||||||||||| targets:873   CUCAUCUAUACCCUUAGUCGUGUU   896 Target Full Sequence	0.0	Zea mays uncharacterized LOC100193698 (LOC100193698), mRNA	NA	coding protein	psRNATarget
BT036033.2	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||||||||||||||||||||| targets:873   CUCAUCUAUACCCUUAGUCGUGUU   896 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0092L19 mRNA, complete cds	NA	coding protein	psRNATarget
EZ076008.1	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   ||||*||||||||||||||||||| targets:40   CUCACCUAUACCCUUAGUCGUGUU   63 Target Full Sequence	0.0	TSA: Zea mays contig11645, mRNA sequence	NA	coding protein	psRNATarget
HI407002.1	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||=|*|||||||||||||||| targets:3   CUCAUUUUUACCCUUAGUCGUGUU   26 Target Full Sequence	2.0	Sequence 5127 from Patent EP2074227	NA	coding protein	psRNATarget
JB167463.1	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||=|*|||||||||||||||| targets:3   CUCAUUUUUACCCUUAGUCGUGUU   26 Target Full Sequence	2.0	Sequence 5127 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239132.1	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||=|*|||||||||||||||| targets:3   CUCAUUUUUACCCUUAGUCGUGUU   26 Target Full Sequence	2.0	Sequence 5127 from Patent EP2985353	NA	coding protein	psRNATarget
BT088229.1	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||=|*|||||||||||||||| targets:1353   CUCAUUUUUACCCUUAGUCGUGUU   1376 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0083G18 mRNA, complete cds	NA	coding protein	psRNATarget
BT062332.1	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||=|*|||||||||||||||| targets:1671   CUCAUUUUUACCCUUAGUCGUGUU   1694 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0282G11 mRNA, complete cds	NA	coding protein	psRNATarget
BT062450.2	ncRNA:24   GAGUAGAUAUGGGAAUCAGCACAA   1   |||||=|*||=||||||||||||| targets:370   CUCAUUUUUAUCCUUAGUCGUGUU   393 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0299A08 mRNA, complete cds	NA	coding protein	psRNATarget