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BaseInfo

ncRNA ID	novel_zma_miR14471
Species	Zea mays
Class	miRNA
Genome position	Chr8:48357722-48357825 [+]
Reference genome	RefGen_v4
Source	SRR2089702
Length	24
Mature sequence(if miRNA)	81 - UGAGGAACCAGGCUCGGCUCGGCU - 104
Stem-loop(if miRNA)	--           UC  CUCG          GUGU   -    U   U  -   A   CUGAGCCGAGC  GG    UCUCAGCUCG    AGC UCGA GCC GA CCG G   |||||||||||  ||    ||||||||||    ||| |||| ||| || |||   GGCUCGGCUCG  CC    GGAGUCGAGC    UCG GGCU CGG CU GGC C UC           GA  --AA          ACUU   U    -   -  C   U
Stem-loop sequence	CUGAGCCGAGCUCGGCUCGUCUCAGCUCGGUGUAGCUCGAUGCCUGACCGAGCUCGGCUCGGCUCGGUGCUUUCACGAGCUGAGGAACCAGGCUCGGCUCGGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001323066.1	ncRNA:24   UCGGCUCGGCUCGGACCAAGGAGU   1   *|||*||*|||||||||||||||| targets:1219   CGCCAAGACGAGCCUGGUUCCUCA   1242 Target Full Sequence	1.0	Zea mays armadillo repeat only 1 (LOC100381961), mRNA	NA	coding protein	psRNATarget
NM_001152240.1	ncRNA:24   UCGG------CUCGGCUCGGACCAAGGAGU   1   ||||------|=|||**||||||||||||| targets:733   AGCCUCCUCGGGGCCAUGCCUGGUUCCUCA   762 Target Full Sequence	3.0	Zea mays RNA recognition motif (RRM)-containing protein (LOC100279216), mRNA	NA	coding protein	psRNATarget
BT053830.1	ncRNA:24   UCGG------CUCGGCUCGGACCAAGGAGU   1   ||||------|=|||**||||||||||||| targets:733   AGCCUCCUCGGGGCCAUGCCUGGUUCCUCA   762 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0214H18 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008656562.2	ncRNA:24   UCGG------CUCGGCUCGGACCAAGGAGU   1   ||||------|=|||**||||||||||||| targets:828   AGCCUCCUCGGGGCCAUGCCUGGUUCCUCA   857 Target Full Sequence	3.0	PREDICTED: Zea mays RNA recognition motif (RRM)-containing protein (LOC100279216), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008656561.2	ncRNA:24   UCGG------CUCGGCUCGGACCAAGGAGU   1   ||||------|=|||**||||||||||||| targets:837   AGCCUCCUCGGGGCCAUGCCUGGUUCCUCA   866 Target Full Sequence	3.0	PREDICTED: Zea mays RNA recognition motif (RRM)-containing protein (LOC100279216), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008656559.2	ncRNA:24   UCGG------CUCGGCUCGGACCAAGGAGU   1   ||||------|=|||**||||||||||||| targets:793   AGCCUCCUCGGGGCCAUGCCUGGUUCCUCA   822 Target Full Sequence	3.0	PREDICTED: Zea mays RNA recognition motif (RRM)-containing protein (LOC100279216), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542054.1	ncRNA:24   UCGG------CUCGGCUCGGACCAAGGAGU   1   ||||------|=|||**||||||||||||| targets:828   AGCCUCCUCGGGGCCAUGCCUGGUUCCUCA   857 Target Full Sequence	3.0	PREDICTED: Zea mays RNA recognition motif (RRM)-containing protein (LOC100279216), transcript variant X4, mRNA	NA	coding protein	psRNATarget
NM_001330558.1	ncRNA:24   UCGGCUCGGCUCGGACCAAGGAGU   1   *|*=|||*||||||||||||||*| targets:113   CGGUGAGGCGAGCCUGGUUCCUGA   136 Target Full Sequence	2.5	Zea mays uncharacterized protein (LOC103636489), mRNA	NA	coding protein	psRNATarget
XM_020542311.1	ncRNA:24   UCGGCUCGGCUCGGACCAAGGAGU   1   *|*=|||*||||||||||||||*| targets:108   CGGUGAGGCGAGCCUGGUUCCUGA   131 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized protein (LOC103636489), transcript variant X1, mRNA	NA	coding protein	psRNATarget