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BaseInfo

ncRNA ID	novel_zma_miR14445
Species	Zea mays
Class	miRNA
Genome position	Chr6:94405593-94405661 [-]
Reference genome	RefGen_v4
Source	SRR2089702
Length	24
Mature sequence(if miRNA)	1 - GGGAUUGAUACGGAUUGAGAGGGA - 24
Stem-loop(if miRNA)	--        GG  UGU      A          A   CUUUUUAG  CU   UCGGUU UUUUCAAUCC U   ||||||||  ||   |||||| ||||||||||   GGAGAGUU  GG   AGUUAG GGAGGUUAGG A AG        -A  CAU      G          U
Stem-loop sequence	CUUUUUAGGGCUUGUUCGGUUAUUUUCAAUCCAUAUGGAUUGGAGGGGAUUGAUACGGAUUGAGAGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539810.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   |||||=|||||||||||||||||| targets:683   UCCCUUUCAAUCCGUAUCAAUCCC   706 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC109940330 (LOC109940330), mRNA	NA	coding protein	psRNATarget
XM_020548987.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   ||||||*||||||||||||||||| targets:1964   UCCCUCCCAAUCCGUAUCAAUCCC   1987 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103648913 (LOC103648913), mRNA	NA	coding protein	psRNATarget
XM_008673290.2	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   ||||||*||||||||||||||||| targets:1964   UCCCUCCCAAUCCGUAUCAAUCCC   1987 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103648912 (LOC103648912), mRNA	NA	coding protein	psRNATarget
NM_001348011.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   ||=||||||||||*|||||||||| targets:429   UCUCUCUCAAUCCAUAUCAAUCCC   452 Target Full Sequence	1.5	Zea mays hypothetical protein (LOC100277538), mRNA	NA	coding protein	psRNATarget
XM_020545207.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   ||=|||*||||||||||||||||| targets:6   UCUCUCCCAAUCCGUAUCAAUCCC   29 Target Full Sequence	1.0	PREDICTED: Zea mays solute carrier family 25 member 44 (LOC100384216), mRNA	NA	coding protein	psRNATarget
BT055069.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   |||||=*||||||||||||||||| targets:960   UCCCUUCCAAUCCGUAUCAAUCCC   983 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0132H13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008658331.2	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   |||=||*|||||||||||=||||| targets:1682   UCCUUCACAAUCCGUAUCGAUCCC   1705 Target Full Sequence	2.5	PREDICTED: Zea mays putative protein phosphatase 2C 46 (LOC103635969), mRNA	NA	coding protein	psRNATarget
EU956568.1	ncRNA:24   AGGGAGAG-UUAGGCAUAGUUAGGG   1   *=||||||-|||||||||||||||| targets:1613   AUCCUCUCUAAUCCGUAUCAAUCCC   1637 Target Full Sequence	2.0	Zea mays clone 1566799 mRNA sequence	NA	coding protein	psRNATarget
NM_001156482.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAG-GG   1   ||=|*|||||||||||||||||-|| targets:872   UCUCCCUCAAUCCGUAUCAAUCACC   896 Target Full Sequence	3.0	Zea mays threonine endopeptidase (LOC100283581), mRNA	NA	coding protein	psRNATarget
EU965203.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAG-GG   1   ||=|*|||||||||||||||||-|| targets:872   UCUCCCUCAAUCCGUAUCAAUCACC   896 Target Full Sequence	3.0	Zea mays clone 284456 threonine endopeptidase mRNA, complete cds	NA	coding protein	psRNATarget
EU953075.1	ncRNA:24   AGGGAGAGUUAGGCAUAGUUAGGG   1   ||=|*|*|||||||||||||||=| targets:992   UCUCCCCCAAUCCGUAUCAAUCUC   1015 Target Full Sequence	2.5	Zea mays clone 1380292 mRNA sequence	NA	coding protein	psRNATarget