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BaseInfo

ncRNA ID novel_zma_miR14420
Species Zea mays
Class miRNA
Genome position Chr3:65848857-65848959 [-]
Reference genome RefGen_v4
Source SRR2089701;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - UUCCCUGGUUUUUCAUAUCGUCGA - 24
Stem-loop(if miRNA) --    GC     -U     U    U    AUCGUCGU     A U      GUU
  GACG  GUGAG  AUCAG GGAA AAUC        UACUU G AAUGGA   G
  ||||  |||||  ||||| |||| ||||        ||||| | ||||||   U
  CUGC  UACUU  UGGUC CCUU UUGG        GUGAG C UUACCU   C
AG    UA     UU     -    U    ------GU     A U      GUA
Stem-loop sequence GACGGCGUGAGUAUCAGUGGAAUAAUCAUCGUCGUUACUUAGUAAUGGAGUUGUCAUGUCCAUUUCAGAGUGUGGGUUUUUCCCUGGUUUUUCAUAUCGUCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646493.2
ncRNA:24   AGCUGCUAUACUUUUUGGUCCCUU   1
  |||*||*|||||||||||||||=|
targets:203   UCGCCGUUAUGAAAAACCAGGGGA   226

2.5 PREDICTED: Zea mays uncharacterized LOC103626117 (LOC103626117), mRNA NA coding protein psRNATarget