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BaseInfo

ncRNA ID	novel_zma_miR14414
Species	Zea mays
Class	miRNA
Genome position	Chr10:87402365-87402494 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	24
Mature sequence(if miRNA)	1 - AUUUUAAAUCUAAUGUCUCUAGUU - 24
Stem-loop(if miRNA)	--      A                  U   GUA  U     UAAG      C    A  UG      AUUUUA AUCUAAUGUCUCUAGUUG UUG   CA UUUAU    GACACC UCCA CG  GUGU   |||||| |||||||||||||||||| |||   || |||||    |||||| |||| ||  |||U   UAAAAU UAGAUUGCAGAGAUCAAC AAU   GU AAAUG    UUGUGG AGGU GU  UAUG AG      C                  U   -AA  U     UUUA      A    G  GA
Stem-loop sequence	AUUUUAAAUCUAAUGUCUCUAGUUGUUUGGUACAUUUUAUUAAGGACACCCUCCAACGUGGUGUUGUAUAGUGGUGGAAGGUGUUAUUUGUAAAUUGAAUAAUCAACUAGAGACGUUAGAUCUAAAAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT087210.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   |||||||||||||||||||||||| targets:450   AACUAGAGACAUUAGAUUUAAAAU   473 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008681116.2	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:3248   AACUAGAGACGUUAGAUCUAAAAU   3271 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020552764.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:3070   AACUAGAGACGUUAGAUCUAAAAU   3093 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008646350.2	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:1719   AACUAGAGACGUUAGAUCUAAAAU   1742 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC103625944), mRNA	NA	coding protein	psRNATarget
JB163735.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:125   AACUAGAGACGUUAGAUCUAAAAU   148 Target Full Sequence	2.5	Sequence 1399 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235404.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:125   AACUAGAGACGUUAGAUCUAAAAU   148 Target Full Sequence	2.5	Sequence 1399 from Patent EP2985353	NA	coding protein	psRNATarget
HI403274.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:125   AACUAGAGACGUUAGAUCUAAAAU   148 Target Full Sequence	2.5	Sequence 1399 from Patent EP2074227	NA	coding protein	psRNATarget
JB163845.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||*|||||||=||||||||||||| targets:124   AAAUAGAGACGUUAGAUUUAAAAU   147 Target Full Sequence	1.0	Sequence 1509 from Patent EP2559767	NA	coding protein	psRNATarget
JB163844.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:124   AACUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1508 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235514.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||*|||||||=||||||||||||| targets:124   AAAUAGAGACGUUAGAUUUAAAAU   147 Target Full Sequence	1.0	Sequence 1509 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235513.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:124   AACUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1508 from Patent EP2985353	NA	coding protein	psRNATarget
HI403384.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||*|||||||=||||||||||||| targets:124   AAAUAGAGACGUUAGAUUUAAAAU   147 Target Full Sequence	1.0	Sequence 1509 from Patent EP2074227	NA	coding protein	psRNATarget
HI403383.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||||||||||=||||||*|||||| targets:124   AACUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1508 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235354.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||=|||||||=||||||*|||||| targets:124   AAUUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1349 from Patent EP2985353	NA	coding protein	psRNATarget
JB163685.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||=|||||||=||||||*|||||| targets:124   AAUUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1349 from Patent EP2559767	NA	coding protein	psRNATarget
HI403224.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||=|||||||=||||||*|||||| targets:124   AAUUAGAGACGUUAGAUCUAAAAU   147 Target Full Sequence	2.5	Sequence 1349 from Patent EP2074227	NA	coding protein	psRNATarget
JB163879.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||=*||||||=||||||*|||||| targets:136   AAUCAGAGACGUUAGAUCUAAAAU   159 Target Full Sequence	2.5	Sequence 1543 from Patent EP2559767	NA	coding protein	psRNATarget
HI403418.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||=*||||||=||||||*|||||| targets:136   AAUCAGAGACGUUAGAUCUAAAAU   159 Target Full Sequence	2.5	Sequence 1543 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235548.1	ncRNA:24   UUGAUCUCUGUAAUCUAAAUUUUA   1   ||=*||||||=||||||*|||||| targets:136   AAUCAGAGACGUUAGAUCUAAAAU   159 Target Full Sequence	2.5	Sequence 1543 from Patent EP2985353	NA	coding protein	psRNATarget