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BaseInfo

ncRNA ID novel_zma_miR14395
Species Zea mays
Class miRNA
Genome position Chr1:77129110-77129194 [-]
Reference genome RefGen_v4
Source SRR2089701
Length 24
Mature sequence(if miRNA) 62 - CGGGUGACGGAUAUGGAUAGCAGA - 85
Stem-loop(if miRNA) --      A            GCAG    CCA  C     AAAU
  CGGGUG CGGAUAUGGAUA    AUAU   UA CCACG    U
  |||||| ||||||||||||    ||||   || |||||    A
  GCCCAU GCCUAUACCUAU    UAUG   AU GGUGC    U
GC      -            --GA    -CC  A     CCAU
Stem-loop sequence CGGGUGACGGAUAUGGAUAGCAGAUAUCCAUACCCACGAAAUUAUUACCCGUGGAUACCGUAUAGUAUCCAUAUCCGUACCCGCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545810.1
ncRNA:24   AGACGAUAGGUAUAGGCAGUGGGC   1
  |*|||||||||||||||||||||*
targets:897   UAUGCUAUCCAUAUCCGUCACCCA   920

1.0 PREDICTED: Zea mays zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC109943047), mRNA NA coding protein psRNATarget
XM_020541316.1
ncRNA:24   AGACGAUAGGUAUAGGCAGUGGGC   1
  |||*||||||||||||*|||||||
targets:1036   UCUACUAUCCAUAUCCAUCACCCG   1059

1.5 PREDICTED: Zea mays ribonuclease P (LOC100285816), mRNA NA coding protein psRNATarget