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BaseInfo

ncRNA ID	osa-miRf11036-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CGUGCCAACGUUUGACUGUC - NA
Stem-loop(if miRNA)	G        -                        A    UUUUU      UUAGUAUUUUCAUUGUU      -U     AA    GU   U CCUGG UUUCCGUG CCAACGUUUGACUGUCCGUCUUAU UGAA     UUAUAA                 GUUAGA  GAUAA  CAUG  UAA A ||||| |||||||| |||||||||||||||||||||||| ||||     ||||||                 ||||||  |||||  ||||  ||| GGACC AAAGGCAC GGUUGCAAACUGGCAGGCAGAAUA ACUU     AAUAUU                 UAAUUU  CUAUU  GUAC  AUU C      -        A                        A    -UUUU      -------------UUUU      UU     CA    GU   U
Stem-loop sequence	CCUGGGUUUCCGUGCCAACGUUUGACUGUCCGUCUUAUAUGAAUUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACAUGGUUAAUACUUUAUGCAUGACUUAUCUUUUUAAUUUUUUUAUAAUUUUUUCAAAUAAGACGGACGGUCAAACGUUGGACACGGAAACCAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288770.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   |||||||||||||||||||| targets:2451   GACAGUCAAACGUUGGCACG   2470 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090067O18, full insert sequence	NA	coding protein	psRNATarget
AK288529.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   |||||||||||||||||||| targets:216   GACAGUCAAACGUUGGCACG   235 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090044M17, full insert sequence	NA	coding protein	psRNATarget
AK288787.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   ||||||||||=||||||||| targets:1883   GACAGUCAAAUGUUGGCACG   1902 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090069N24, full insert sequence	NA	coding protein	psRNATarget
XM_015784718.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   ||||||||||=||||||||* targets:1533   GACAGUCAAAUGUUGGCACA   1552 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group basic 7S globulin (LOC4326528), mRNA	basic 7S globulin(LOC4326528)	coding protein	psRNATarget
AK287584.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   |||=|||||||||||*|||| targets:1332   GACGGUCAAACGUUGACACG   1351 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065044J10, full insert sequence	NA	coding protein	psRNATarget
XM_015771325.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   |||=|||||||||||*|||| targets:1355   GACGGUCAAACGUUGACACG   1374 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein synthesis inhibitor I (LOC4324068), mRNA	protein synthesis inhibitor I(LOC4324068)	coding protein	psRNATarget
XM_015772621.1	ncRNA:20   CUGUCAGUUUGCAACCGUGC   1   ||||||*|||||||||||=| targets:545   GACAGUGAAACGUUGGCAUG   564 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4332894 (LOC4332894), mRNA	uncharacterized LOC4332894(LOC4332894)	coding protein	psRNATarget