Search result

BaseInfo

ncRNA ID	novel_zma_miR14388
Species	Zea mays
Class	miRNA
Genome position	Chr1:267787651-267787750 [+]
Reference genome	RefGen_v4
Source	SRR2089701
Length	24
Mature sequence(if miRNA)	1 - ACAGUACAAAAUGAUGCAAAACAG - 24
Stem-loop(if miRNA)	--    UA                    A     G          AG  A   ACAG  CAAAAUGAUGCAAAACAGUG UUUUG UGACCAUAUG  UG A   ||||  |||||||||||||||||||| ||||| ||||||||||  || C   UGUU  GUUUUGCUACGUUUUGUCAU AAAAC ACUGGUAUAC  AC U AA    CC                    A     -          CU  A
Stem-loop sequence	ACAGUACAAAAUGAUGCAAAACAGUGAUUUUGGUGACCAUAUGAGUGAACUACAUCCAUAUGGUCACAAAAAUACUGUUUUGCAUCGUUUUGCCUUGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT017741.1	ncRNA:24   GACAAAACGUAGUAAAACAUGACA   1   *|*||||||||=|||||||||||| targets:1157   AUAUUUUGCAUUAUUUUGUACUGU   1180 Target Full Sequence	1.5	Zea mays clone EL01N0449D03.c mRNA sequence	NA	coding protein	psRNATarget
XM_008658353.2	ncRNA:24   GACAAAACGUAGUAAAACAUGACA   1   *|*||||||||=|||||||||||| targets:7945   AUAUUUUGCAUUAUUUUGUACUGU   7968 Target Full Sequence	1.5	PREDICTED: Zea mays transducin family protein / WD-40 repeat family protein (LOC103635990), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008658352.2	ncRNA:24   GACAAAACGUAGUAAAACAUGACA   1   *|*||||||||=|||||||||||| targets:8102   AUAUUUUGCAUUAUUUUGUACUGU   8125 Target Full Sequence	1.5	PREDICTED: Zea mays transducin family protein / WD-40 repeat family protein (LOC103635990), transcript variant X1, mRNA	NA	coding protein	psRNATarget