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BaseInfo

ncRNA ID	novel_zma_miR14385
Species	Zea mays
Class	miRNA
Genome position	Chr1:250935353-250935549 [+]
Reference genome	RefGen_v4
Source	SRR2089701
Length	24
Mature sequence(if miRNA)	1 - UACUAGGUGCAAGCGUGUAAGCAG - 24
Stem-loop(if miRNA)	--                     C    U   UAGC            U           -AA    AUUG    UUG     UU       AAA     A   UACUAGGUGCAAGCGUGUAAG AGAC UUU    CCGUUAGAUCUG AUCCAACGGUA   UAUA    UGGU   UUAGG  UUUUUAU   GCUAU C   ||||||||||||||||||||| |||| |||    |||||||||||| |||||||||||   ||||    ||||   |||||  |||||||   ||||| C   AUGAUCCACGUUCGUGCGUUC UCUG AAA    GGCAAUCUAGAU UAGGUUGCCAU   GUAU    AUCG   AAUUU  GAAGGUG   UGGUG A AC                     C    U   CCUA            C           ACA    --AA    -UG     GG       --G     G
Stem-loop sequence	UACUAGGUGCAAGCGUGUAAGCAGACUUUUUAGCCCGUUAGAUCUGUAUCCAACGGUAAAUAUAAUUGUGGUUUGUUAGGUUUUUUUAUAAAGCUAUACCAGGUGGUGGUGGAAGGGUUUAAGUGCUAAAUAUGACAUACCGUUGGAUCUAGAUCUAACGGAUCCAAAUGUCUCCUUGCGUGCUUGCACCUAGUACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543506.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||||||||||||||||||| targets:824   CUGCUUACACGCUUGCACCUAGUA   847 Target Full Sequence	0.0	PREDICTED: Zea mays putative RING zinc finger domain superfamily protein (LOC100216754), transcript variant X2, mRNA	NA	coding protein	psRNATarget
HI410097.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:196   CUGCUUAUACGCUUGCACCUAGUA   219 Target Full Sequence	1.0	Sequence 8222 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242227.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:196   CUGCUUAUACGCUUGCACCUAGUA   219 Target Full Sequence	1.0	Sequence 8222 from Patent EP2985353	NA	coding protein	psRNATarget
JB170558.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:196   CUGCUUAUACGCUUGCACCUAGUA   219 Target Full Sequence	1.0	Sequence 8222 from Patent EP2559767	NA	coding protein	psRNATarget
EU956751.1	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   |||||||=|||||||||||||||| targets:1005   CUGCUUAUACGCUUGCACCUAGUA   1028 Target Full Sequence	1.0	Zea mays clone 1572581 mRNA sequence	NA	coding protein	psRNATarget
NM_001154384.2	ncRNA:24   GACGAAUGUGCGAACGUGGAUCAU   1   *|*|*||*|||||||||||||||| targets:1   AUUCAUAAACGCUUGCACCUAGUA   24 Target Full Sequence	1.0	Zea mays uncharacterized LOC100281466 (cl33552_1), mRNA	NA	coding protein	psRNATarget