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BaseInfo

ncRNA ID novel_zma_miR14382
Species Zea mays
Class miRNA
Genome position Chr9:27100020-27100216 [+]
Reference genome RefGen_v4
Source SRR2089701;SRR2089704;SRR2089708
Length 24
Mature sequence(if miRNA) 174 - CGGGACACUCGGCAAAGACGCUGU - 197
Stem-loop(if miRNA) -----AG            -    AAUGUCUCUGACACUCGGCAAAGAGGCACACUUUGCCGAGUGCCGUACCUAGCACUCGGCAAAGAACCUGACAUGG
       GUCCUUUGUCGA GUGU                                                                            G
       |||||||||||| ||||                                                                            G
       GAAACGGCUCAC GGGC                                                                            A
UGUCGCA            A    CCACUGUGAGCCGUUUCCUCAAUGGAAAUGGUUCACACACGGGCUGUCGGGAGCCGUUUCUUGGGCGGUCCCUCCC
Stem-loop sequence AGGUCCUUUGUCGAGUGUAAUGUCUCUGACACUCGGCAAAGAGGCACACUUUGCCGAGUGCCGUACCUAGCACUCGGCAAAGAACCUGACAUGGGGACCCUCCCUGGCGGGUUCUUUGCCGAGGGCUGUCGGGCACACACUUGGUAAAGGUAACUCCUUUGCCGAGUGUCACCCGGGACACUCGGCAAAGACGCUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167100.1
ncRNA:24   UGUCGCAGAAACGGCUCACAGGGC   1
  |==|*||||||||||||||||||*
targets:15   AUGGAGUCUUUGCCGAGUGUCCCU   38

1.0 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
HI406639.1
ncRNA:24   UGUCGCAGAAACGGCUCACAGGGC   1
  |==|*||||||||||||||||||*
targets:15   AUGGAGUCUUUGCCGAGUGUCCCU   38

1.0 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   UGUCGCAGAAACGGCUCACAGGGC   1
  |==|*||||||||||||||||||*
targets:15   AUGGAGUCUUUGCCGAGUGUCCCU   38

1.0 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget