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BaseInfo

ncRNA ID	osa-miRf11035-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UCGUGAGGUACCGGUACCUCGAG - NA
Stem-loop(if miRNA)	A  C  UA        A              AAAACA   A                -CUG  AA UAAAAA UA CU  AGGUACCG UAUCUCACGGUACC      UUU CGAUCGUUGGAUCUAG    GC  G |||||| || ||  |||||||| ||||||||||||||      ||| ||||||||||||||||    ||  A AUUUUU AU GA  UCCAUGGC AUGGAGUGCUAUGG      AAA GCUAGCAAUCUAGAUU    CG  U       C  A  GC        C              AUUAAC   A                AUUA  AG
Stem-loop sequence	UAAAAAAUACCUUAAGGUACCGAUAUCUCACGGUACCAAAACAUUUACGAUCGUUGGAUCUAGCUGGCAAGAUGAGCAUUAUUAGAUCUAACGAUCGAAAACAAUUAGGUAUCGUGAGGUACCGGUACCUCGAGAUACUUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235663.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   |||||||||||||||||*||||= targets:26   CUCGAGGUACCGGUACCCCACGG   48 Target Full Sequence	2.5	Sequence 1658 from Patent EP2985353	NA	coding protein	psRNATarget
HI403533.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   |||||||||||||||||*||||= targets:26   CUCGAGGUACCGGUACCCCACGG   48 Target Full Sequence	2.5	Sequence 1658 from Patent EP2074227	NA	coding protein	psRNATarget
JB163994.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   |||||||||||||||||*||||= targets:26   CUCGAGGUACCGGUACCCCACGG   48 Target Full Sequence	2.5	Sequence 1658 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   ||||||||||||*|||||||||= targets:636   CUCGAGGUACCGAUACCUCACGG   658 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
XM_015760380.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   |||||*||||||||||||||||= targets:1027   CUCGAAGUACCGGUACCUCACGG   1049 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase homolog At5g06060 (LOC4326949), mRNA	tropinone reductase homolog At5g06060(LOC4326949)	coding protein	psRNATarget
AK287529.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   ||||||||||||*|||||||||= targets:147   CUCGAGGUACCGAUACCUCACGG   169 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   ||||||||||||*|||||||||= targets:147   CUCGAGGUACCGAUACCUCACGG   169 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
XM_015795856.1	ncRNA:23   GAGCUCCAUGGCCAUGGAGUGCU   1   *|||||*|||||||||||||=|| targets:414   AUCGAGUUACCGGUACCUCAUGA   436 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347512 (LOC4347512), transcript variant X1, mRNA	uncharacterized LOC4347512(LOC4347512)	coding protein	psRNATarget