Search result

BaseInfo

ncRNA ID novel_zma_miR14375
Species Zea mays
Class miRNA
Genome position Chr1:191559996-191560164 [+]
Reference genome RefGen_v4
Source SRR2089701
Length 24
Mature sequence(if miRNA) 146 - UUCUUAACGUUAAGUUCGUCGGGG - 169
Stem-loop(if miRNA) --   U         AUA                          ------------C GGAACAAAUUCAACGGCCCCCGUCGAACUUAA
  CCG CGAACUUAA   UAAGAACGUGGGUGCCGUCGAACUUA             G                                A
  ||| |||||||||   ||||||||||||||||||||||||||             |                                A
  GGC GCUUGAAUU   AUUCUUGCACCCAUGGCAGCUUGAAU             C                                A
GG   U         GCA                          UGUAAUUUUUGCA CCAUGGCAGCUUGAAUUGUAAUUCUUGCACCC
Stem-loop sequence CCGUCGAACUUAAAUAUAAGAACGUGGGUGCCGUCGAACUUACGGGAACAAAUUCAACGGCCCCCGUCGAACUUAAAAACCCACGUUCUUAAUGUUAAGUUCGACGGUACCCACGUUUUUAAUGUUAAGUUCGACGGUACCCACGUUCUUAACGUUAAGUUCGUCGGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167143.1
ncRNA:24   GGGGCUGCUUGAAUUGCAAUUCUU   1
  |||||*|||||||||*||||||||
targets:5   CCCCGUCGAACUUAAGGUUAAGAA   28

2.5 Sequence 4807 from Patent EP2559767 NA coding protein psRNATarget
LQ238812.1
ncRNA:24   GGGGCUGCUUGAAUUGCAAUUCUU   1
  |||||*|||||||||*||||||||
targets:5   CCCCGUCGAACUUAAGGUUAAGAA   28

2.5 Sequence 4807 from Patent EP2985353 NA coding protein psRNATarget
HI406682.1
ncRNA:24   GGGGCUGCUUGAAUUGCAAUUCUU   1
  |||||*|||||||||*||||||||
targets:5   CCCCGUCGAACUUAAGGUUAAGAA   28

2.5 Sequence 4807 from Patent EP2074227 NA coding protein psRNATarget