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BaseInfo

ncRNA ID	novel_zma_miR14353
Species	Zea mays
Class	miRNA
Genome position	Chr9:73635704-73635827 [-]
Reference genome	RefGen_v4
Source	SRR1583942
Length	24
Mature sequence(if miRNA)	101 - UGUAUCCGAUCUAGAUCUAAUGAU - 124
Stem-loop(if miRNA)	--U         C             ----------------GAUU    UUUUAUAUUUAACCCCUUCC    GUAUCCGAU UAGAUCUAAUGAU                    GUUA                    A    ||||||||| |||||||||||||                    ||||    CGUAGGUUA GUCUAGGUUGCUA                    UCAU                    C UCU         A             AAAUAUACCUUCCCCAAUUU    UUUAUCCAUGAUACAAAAUC
Stem-loop sequence	UGUAUCCGAUCUAGAUCUAAUGAUGAUUGUUAUUUUAUAUUUAACCCCUUCCACCUAAAACAUAGUACCUAUUUUACUUUUAACCCCUUCCAUAUAAAAUCGUUGGAUCUGAAUUGGAUGCUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU954880.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   |||||||||||||||||||||=|| targets:758   AUCAUUAGAUCUAGAUCGGAUGCA   781 Target Full Sequence	1.5	Zea mays clone 1489976 ubiquitin-fusion protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008661850.2	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   |||||||||||||||||||||=|| targets:759   AUCAUUAGAUCUAGAUCGGAUGCA   782 Target Full Sequence	1.5	PREDICTED: Zea mays membrane-anchored ubiquitin-fold protein 1 (LOC103639057), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008661851.2	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   |||||||||||||||||||||=|| targets:772   AUCAUUAGAUCUAGAUCGGAUGCA   795 Target Full Sequence	1.5	PREDICTED: Zea mays membrane-anchored ubiquitin-fold protein 1 (LOC103639057), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020551352.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   |||||||||||||||||||||=|| targets:161   AUCAUUAGAUCUAGAUCGGAUGCA   184 Target Full Sequence	1.5	PREDICTED: Zea mays putative glutathione S-transferase family protein (LOC100272773), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI403100.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   ||||||=|||||||||=||||||| targets:138   AUCAUUGGAUCUAGAUUGGAUACA   161 Target Full Sequence	2.5	Sequence 1225 from Patent EP2074227	NA	coding protein	psRNATarget
JB163438.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   ||||||=|||||||||=||||||| targets:138   AUCAUUGGAUCUAGAUUGGAUACA   161 Target Full Sequence	2.5	Sequence 1102 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235107.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   ||||||=|||||||||=||||||| targets:138   AUCAUUGGAUCUAGAUUGGAUACA   161 Target Full Sequence	2.5	Sequence 1102 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235230.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   ||||||=|||||||||=||||||| targets:138   AUCAUUGGAUCUAGAUUGGAUACA   161 Target Full Sequence	2.5	Sequence 1225 from Patent EP2985353	NA	coding protein	psRNATarget
JB163561.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   ||||||=|||||||||=||||||| targets:138   AUCAUUGGAUCUAGAUUGGAUACA   161 Target Full Sequence	2.5	Sequence 1225 from Patent EP2559767	NA	coding protein	psRNATarget
HI402977.1	ncRNA:24   UAGUAAUCUAGAUCUAGCCUAUGU   1   ||||||=|||||||||=||||||| targets:138   AUCAUUGGAUCUAGAUUGGAUACA   161 Target Full Sequence	2.5	Sequence 1102 from Patent EP2074227	NA	coding protein	psRNATarget