ncRNA ID | novel_zma_miR14348 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:109398465-109398579 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089701 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGGACUGUCCGGUGUAGCAUCG - 24 |
Stem-loop(if miRNA) |
--    GC         GU        -----CACCA     -AAUCA  CU       CC   GUGU  CACCGGACA  GUCCGGUG          GGGAG      CU  GAACUUG  A   ||||  |||||||||  ||||||||          |||||      ||  |||||||  C   UACG  GUGGCCUGU  CAGGCUAC          CCCUC      GG  UUUGAGC  C GC    AU         --        UUAAUAUCGC     ACUAAA  UU       UU |
Stem-loop sequence | GUGUGCCACCGGACAGUGUCCGGUGCACCAGGGAGAAUCACUCUGAACUUGCCACCUUCGAGUUUUUGGAAAUCACUCCCCGCUAUAAUUCAUCGGACUGUCCGGUGUAGCAUCG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069074.2 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT065921.2 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFc0044K19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175687.1 |
|
2.0 | Zea mays uncharacterized LOC100383005 (LOC100383005), mRNA | NA | coding protein | psRNATarget |