Search result

BaseInfo

ncRNA ID	novel_zma_miR14335
Species	Zea mays
Class	miRNA
Genome position	Chr5:41178433-41178516 [+]
Reference genome	RefGen_v4
Source	SRR2089701
Length	24
Mature sequence(if miRNA)	61 - AAGUACUCGGCAAAGAAAAGCAGC - 84
Stem-loop(if miRNA)	--A  -C                    CUC  A      A   A    GC  UUCUUUGCCGAGUACUUUUU   GG CACUCG CAA G    ||  ||||||||||||||||||||   || |||||| ||| G    CG  AAGAAACGGCUCAUGAAGGA   CC GUGAGC GUU C CGA  AA                    ---  -      C   U
Stem-loop sequence	AGCCUUCUUUGCCGAGUACUUUUUCUCGGACACUCGACAAAGGCUUUGCCGAGUGCCAGGAAGUACUCGGCAAAGAAAAGCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407253.1	ncRNA:24   CGACGAAAAGAAACGGCUCAUGAA   1   *******||||||||||||||||| targets:27   CAAAGCCUUCUUUGCCGAGUACUU   50 Target Full Sequence	2.0	Sequence 5378 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239383.1	ncRNA:24   CGACGAAAAGAAACGGCUCAUGAA   1   *******||||||||||||||||| targets:27   CAAAGCCUUCUUUGCCGAGUACUU   50 Target Full Sequence	2.0	Sequence 5378 from Patent EP2985353	NA	coding protein	psRNATarget
JB167714.1	ncRNA:24   CGACGAAAAGAAACGGCUCAUGAA   1   *******||||||||||||||||| targets:27   CAAAGCCUUCUUUGCCGAGUACUU   50 Target Full Sequence	2.0	Sequence 5378 from Patent EP2559767	NA	coding protein	psRNATarget