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BaseInfo

ncRNA ID	novel_zma_miR14322
Species	Zea mays
Class	miRNA
Genome position	Chr4:164062253-164062316 [-]
Reference genome	RefGen_v4
Source	SRR2089701
Length	24
Mature sequence(if miRNA)	41 - AACGGAGACAUAUAAUAUCACAGU - 64
Stem-loop(if miRNA)	--                 U    GUAACUUA   AACGGAGACAUAUAAUA CACA        U   ||||||||||||||||| ||||        A   UUGCCUCUGUAUAUUAU GUGU        U CG                 -    AUAAAAUA
Stem-loop sequence	AACGGAGACAUAUAAUAUCACAGUAACUUAUAUAUAAAAUAUGUGUAUUAUAUGUCUCCGUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020541369.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=||||=||||||||||=|||||| targets:3399   AUUGUGGUAUUAUAUGUUUCCGUU   3422 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103633193 (LOC103633193), transcript variant X1, mRNA	NA	coding protein	psRNATarget
HI407251.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   ||*|||||||||||||||*||||| targets:49   ACCGUGAUAUUAUAUGUCCCCGUU   72 Target Full Sequence	1.5	Sequence 5376 from Patent EP2074227	NA	coding protein	psRNATarget
JB167712.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   ||*|||||||||||||||*||||| targets:49   ACCGUGAUAUUAUAUGUCCCCGUU   72 Target Full Sequence	1.5	Sequence 5376 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239381.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   ||*|||||||||||||||*||||| targets:49   ACCGUGAUAUUAUAUGUCCCCGUU   72 Target Full Sequence	1.5	Sequence 5376 from Patent EP2985353	NA	coding protein	psRNATarget
EU974737.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   ==||||*||||||||||=|||||| targets:729   GUUGUGUUAUUAUAUGUUUCCGUU   752 Target Full Sequence	2.5	Zea mays clone 457149 mRNA sequence	NA	coding protein	psRNATarget
XM_020546475.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   ||*|||||||||||||||*||||| targets:1281   ACCGUGAUAUUAUAUGUCCCCGUU   1304 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109943445 (LOC109943445), mRNA	NA	coding protein	psRNATarget
XM_020542748.1	ncRNA:24   UGACAC-UAUAAUAUACAGAGGCAA   1   |*||||-=||||||||||||||||| targets:1174   AAUGUGUGUAUUAUAUGUCUCCGUU   1198 Target Full Sequence	3.0	PREDICTED: Zea mays pre-rRNA-processing protein TSR1 homolog (LOC103635667), mRNA	NA	coding protein	psRNATarget
XM_020548644.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   ||*||||*|||||||||=|||||| targets:670   ACCGUGACAUUAUAUGUUUCCGUU   693 Target Full Sequence	2.5	PREDICTED: Zea mays mitochondrial adenine nucleotide transporter ADNT1-like (LOC103649350), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020552623.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=*|*||||||||||||||||||| targets:826   AUCGAGAUAUUAUAUGUCUCCGUU   849 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103653749 (LOC103653749), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT083780.2	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=**|||||||||||||=|||||| targets:69   AUCAUGAUAUUAUAUGUUUCCGUU   92 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0039F15 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001177118.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=**|||||||||||||=|||||| targets:69   AUCAUGAUAUUAUAUGUUUCCGUU   92 Target Full Sequence	1.5	Zea mays uncharacterized LOC100384622 (LOC100384622), mRNA	NA	coding protein	psRNATarget
BT069760.2	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=**|||||||||||||=|||||| targets:1453   AUCAUGAUAUUAUAUGUUUCCGUU   1476 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0229D16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020543896.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=*|*|||||||||||||||=||| targets:1898   AUCGAGAUAUUAUAUGUCUCUGUU   1921 Target Full Sequence	1.5	PREDICTED: Zea mays probable glucuronosyltransferase Os05g0559600 (LOC103639412), transcript variant X14, mRNA	NA	coding protein	psRNATarget
EZ065089.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |=**||=||||||||||=|||||| targets:54   AUCAUGGUAUUAUAUGUUUCCGUU   77 Target Full Sequence	2.5	TSA: Zea mays contig00721, mRNA sequence	NA	coding protein	psRNATarget
LQ240721.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |||***|||||||||||||||||| targets:43   ACUUAUAUAUUAUAUGUCUCCGUU   66 Target Full Sequence	1.0	Sequence 6716 from Patent EP2985353	NA	coding protein	psRNATarget
HI408591.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |||***|||||||||||||||||| targets:43   ACUUAUAUAUUAUAUGUCUCCGUU   66 Target Full Sequence	1.0	Sequence 6716 from Patent EP2074227	NA	coding protein	psRNATarget
JB169052.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |||***|||||||||||||||||| targets:43   ACUUAUAUAUUAUAUGUCUCCGUU   66 Target Full Sequence	1.0	Sequence 6716 from Patent EP2559767	NA	coding protein	psRNATarget
EU973696.1	ncRNA:24   UGACACUAUAAUAUACAGAGGCAA   1   |||***|||||||||||||||||| targets:1011   ACUUAUAUAUUAUAUGUCUCCGUU   1034 Target Full Sequence	1.0	Zea mays clone 406768 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget