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BaseInfo

ncRNA ID	osa-miRf11029-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - AAUGCCAUGUCCUCGUCCUAGGUG - NA
Stem-loop(if miRNA)	C       A               -  C    AUUUC  GC GUGGUUGUU CAUCUAG AUGAGGACGUGGCAU CU AUUA     GC  G ||||||||| ||||||| ||||||||||||||| || ||||     || CACCGACAA GUGGAUC UGCUCCUGUACCGUA GA UAAU     CG  A          A       C               A  -    --GGU  GU
Stem-loop sequence	GUGGUUGUUCCAUCUAGAAUGAGGACGUGGCAUCUCAUUAAUUUCGCGCGAUGGCUGGUAAUAGAAUGCCAUGUCCUCGUCCUAGGUGAAACAGCCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015768630.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   |||||||||||||||||||*|||| targets:302   CACCUAGGACGAGGACAUGACAUU   325 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group transmembrane protein 56-B (LOC4327490), transcript variant X5, mRNA	transmembrane protein 56-B(LOC4327490)	coding protein	psRNATarget
AY536061.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||*|*|||||||||||||||*||| targets:327   CAGCAAGGACGAGGACAUGGAAUU   350 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) phosphatidylinositol 4-kinase (PI4K2) mRNA, partial cds	NA	coding protein	psRNATarget
CT829430.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||*|*|||||||||||||||*||| targets:1348   CAGCAAGGACGAGGACAUGGAAUU   1371 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA028P09, full insert sequence	NA	coding protein	psRNATarget
AK068331.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||*|*|||||||||||||||*||| targets:1380   CAGCAAGGACGAGGACAUGGAAUU   1403 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013145M04, full insert sequence	NA	coding protein	psRNATarget
XM_015761640.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||*|*|||||||||||||||*||| targets:1434   CAGCAAGGACGAGGACAUGGAAUU   1457 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group phosphatidylinositol 4-kinase beta 1 (LOC9267129), mRNA	phosphatidylinositol 4-kinase beta 1(LOC9267129)	coding protein	psRNATarget
XM_015790434.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||*=*|*|=||||||||||||||| targets:828   CAAUGACGGCGAGGACAUGGCAUU   851 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group NAC domain-containing protein 67-like (LOC107275858), mRNA	NAC domain-containing protein 67-like(LOC107275858)	coding protein	psRNATarget
XM_015777721.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||=-||||||**|||||||||||| targets:236   CAU-UAGGACAUGGACAUGGCAUU   258 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group long chain base biosynthesis protein 1a (LOC4332274), transcript variant X4, mRNA	long chain base biosynthesis protein 1a(LOC4332274)	coding protein	psRNATarget
XM_015777719.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||=-||||||**|||||||||||| targets:236   CAU-UAGGACAUGGACAUGGCAUU   258 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group long chain base biosynthesis protein 1a (LOC4332274), transcript variant X1, mRNA	long chain base biosynthesis protein 1a(LOC4332274)	coding protein	psRNATarget
CT829540.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||=-||||||**|||||||||||| targets:182   CAU-UAGGACAUGGACAUGGCAUU   204 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA114C07, full insert sequence	NA	coding protein	psRNATarget
XM_015777722.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||=-||||||**|||||||||||| targets:280   CAU-UAGGACAUGGACAUGGCAUU   302 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group long chain base biosynthesis protein 1a (LOC4332274), transcript variant X5, mRNA	long chain base biosynthesis protein 1a(LOC4332274)	coding protein	psRNATarget
AK065537.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||=-||||||**|||||||||||| targets:227   CAU-UAGGACAUGGACAUGGCAUU   249 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013026J17, full insert sequence	NA	coding protein	psRNATarget
AK067765.1	ncRNA:24   GUGGAUCCUGCUCCUGUACCGUAA   1   ||=-||||||**|||||||||||| targets:222   CAU-UAGGACAUGGACAUGGCAUU   244 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013120O07, full insert sequence	NA	coding protein	psRNATarget