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BaseInfo

ncRNA ID novel_zma_miR14315
Species Zea mays
Class miRNA
Genome position Chr4:18601825-18601877 [+]
Reference genome RefGen_v4
Source SRR2089701
Length 24
Mature sequence(if miRNA) 30 - ACCGUUCUGUAGUUGAACAGGCUC - 53
Stem-loop(if miRNA) --  AG     UG      AG     U
  GC  CUGUU  ACUACA  AUGGU G
  ||  |||||  ||||||  ||||| A
  CG  GACAA  UGAUGU  UGCCA G
CU  --     GU      CU     A
Stem-loop sequence GCAGCUGUUUGACUACAAGAUGGUUGAGAACCGUUCUGUAGUUGAACAGGCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ240824.1
ncRNA:24   CUCGGACAAGUUGAUGUCUUGCCA   1
  ||||||||||*||||||||*||||
targets:9   GAGCCUGUUCCACUACAGAUCGGU   32

2.5 Sequence 6819 from Patent EP2985353 NA coding protein psRNATarget
JB169155.1
ncRNA:24   CUCGGACAAGUUGAUGUCUUGCCA   1
  ||||||||||*||||||||*||||
targets:9   GAGCCUGUUCCACUACAGAUCGGU   32

2.5 Sequence 6819 from Patent EP2559767 NA coding protein psRNATarget
HI408694.1
ncRNA:24   CUCGGACAAGUUGAUGUCUUGCCA   1
  ||||||||||*||||||||*||||
targets:9   GAGCCUGUUCCACUACAGAUCGGU   32

2.5 Sequence 6819 from Patent EP2074227 NA coding protein psRNATarget