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BaseInfo

ncRNA ID	osa-miRf11028-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UCGAGCUAGCUCGCGAGCCAAA - NA
Stem-loop(if miRNA)	--A        U    U     -   --  A     CUCGUUGCAUUUUCAUAACGUGCC AGCUC   UGGCUCGU AGCU GCUCG GCU  CG CUUGG                        A |||||   |||||||| |||| ||||| |||  || ||||| UCGAG   ACCGAGCG UCGA CGAGC CGA  GA GUAAU                        A      CAA        C    U     U   CC  -     AGAAAUUGCUCAAUUUUACGGUCG
Stem-loop sequence	AGCUCAUGGCUCGUUAGCUUGCUCGGCUCGACUUGGCUCGUUGCAUUUUCAUAACGUGCCAAGCUGGCAUUUUAACUCGUUAAAGAUAAUGAGCCAGCUCGAGCUAGCUCGCGAGCCAAACGAGCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015775838.1	ncRNA:22   AAACCGAGCGCUCGAUCGAGCU   1   **||||*|||*||||||||||| targets:2257   CAUGGCGCGCUAGCUAGCUCGA   2278 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group calcium-dependent protein kinase 10 (LOC4333767), mRNA	calcium-dependent protein kinase 10(LOC4333767)	coding protein	psRNATarget
AK105102.1	ncRNA:22   AAACCGAGCGCUCGAUCGAGCU   1   **||||*|||*||||||||||| targets:1851   CAUGGCGCGCUAGCUAGCUCGA   1872 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-100-D05, full insert sequence	NA	coding protein	psRNATarget
EF576188.1	ncRNA:22   AAACCGAGCGCUCGAUCGAGCU   1   **||||*|||*||||||||||| targets:51   CAUGGCGCGCUAGCUAGCUCGA   72 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) clone OSR-1-96-E6 calcium-dependent protein kinase mRNA, partial cds	NA	coding protein	psRNATarget
XM_015774504.1	ncRNA:22   AAACCGAGCGCUCGAUCGAGCU   1   ***||||*||||||*||||||| targets:674   AGAGGCUGGCGAGCCAGCUCGA   695 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative pumilio homolog 7, chloroplastic (LOC4331909), mRNA	putative pumilio homolog 7, chloroplastic(LOC4331909)	coding protein	psRNATarget
AK106885.1	ncRNA:22   AAACCGAGCGCUCGAUCGAGCU   1   ***||||*||||||*||||||| targets:673   AGAGGCUGGCGAGCCAGCUCGA   694 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-118-F08, full insert sequence	NA	coding protein	psRNATarget