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BaseInfo

ncRNA ID novel_zma_miR14309
Species Zea mays
Class miRNA
Genome position Chr3:9136763-9136868 [+]
Reference genome RefGen_v4
Source SRR2089700;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - CUAGUAAUGAAAGGGAUUGGAGUG - 24
Stem-loop(if miRNA) --      AU    G  A         -AU   GAUGCAUUAUGAGAGUUUUU
  CUAGUA  GAAA GG UUGGAGUGG   UAA                    G
  ||||||  |||| || |||||||||   |||                    A
  GAUCAU  CUUU CC AACCUCACU   CUC                    U
GA      AU    A  A         AAC   UCACAUAUUUAGGAAUUAUC
Stem-loop sequence CUAGUAAUGAAAGGGAUUGGAGUGGAUUAAGAUGCAUUAUGAGAGUUUUUGAUCUAUUAAGGAUUUAUACACUCUCCAAUCACUCCAAACCAUUUCUAUACUAGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ056559.1
ncRNA:24   GUGAGGUUAGGGAAAGUAAUGAUC   1
  ||||||||||*|*|||||||||||
targets:3   CACUCCAAUCGCAUUCAUUACUAG   26

2.5 TSA: Zea mays contig57681, mRNA sequence NA coding protein psRNATarget