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BaseInfo

ncRNA ID	novel_zma_miR14307
Species	Zea mays
Class	miRNA
Genome position	Chr9:103554762-103554844 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	21
Mature sequence(if miRNA)	1 - UUUUCUAGAUACAUAACUUCU - 21
Stem-loop(if miRNA)	--             U     C      A               UUUUCUAGAUACA AACUU UGCUAU UAUUUAGAUAUGC   ||||||||||||| ||||| |||||| ||||||||||||A   AAAAGAUUUAUGU UUGAA ACGAUA AUGGAUCUGUAUC CA             C     A      C
Stem-loop sequence	UUUUCUAGAUACAUAACUUCUGCUAUAUAUUUAGAUAUGCACUAUGUCUAGGUACAUAGCAAAAGUUCUGUAUUUAGAAAAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT017431.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*|||||=||||||||||||| targets:724   AAAAGUUGUGUAUCUAGAAAA   744 Target Full Sequence	1.0	Zea mays clone EL01N0403D07.c mRNA sequence	NA	coding protein	psRNATarget
XM_020546762.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*|||*||||||||||||||| targets:3125   AAAAGCUAUGUAUCUAGAAAA   3145 Target Full Sequence	1.0	PREDICTED: Zea mays serine/threonine protein phosphatase 2A regulatory subunit B''beta (LOC103643458), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548465.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*|||*||||||||||||||| targets:2480   AAAAGCUAUGUAUCUAGAAAA   2500 Target Full Sequence	1.0	PREDICTED: Zea mays histone-lysine N-methyltransferase family member SUVH2 (LOC103647308), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546061.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |||||*||||||||*|||||| targets:1883   AGAAGCUAUGUAUCCAGAAAA   1903 Target Full Sequence	2.5	PREDICTED: Zea mays eukaryotic peptide chain release factor GTP-binding subunit ERF3A (LOC100384492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546060.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |||||*||||||||*|||||| targets:1876   AGAAGCUAUGUAUCCAGAAAA   1896 Target Full Sequence	2.5	PREDICTED: Zea mays eukaryotic peptide chain release factor GTP-binding subunit ERF3A (LOC100384492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT042146.2	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*||||*|||||||||||||| targets:235   AAAAGUGAUGUAUCUAGAAAA   255 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0146F01 mRNA, complete cds	NA	coding protein	psRNATarget
EU955264.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |||||*||||||||*|||||| targets:474   AGAAGCUAUGUAUCCAGAAAA   494 Target Full Sequence	2.5	Zea mays clone 1521911 mRNA sequence	NA	coding protein	psRNATarget
EU956616.1	ncRNA:21   UCUUCA-AUACAUAGAUCUUUU   1   ***|||-||||||||||||||| targets:1902   UAUAGUAUAUGUAUCUAGAAAA   1923 Target Full Sequence	3.0	Zea mays clone 1568188 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149598.1	ncRNA:21   UCUUCA-AUACAUAGAUCUUUU   1   ***|||-||||||||||||||| targets:1902   UAUAGUAUAUGUAUCUAGAAAA   1923 Target Full Sequence	3.0	Zea mays hypothetical protein (cl2814_1a), mRNA	NA	coding protein	psRNATarget
BT066991.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |**|||||||||||*|||||| targets:662   AACAGUUAUGUAUCCAGAAAA   682 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0138L04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008676757.2	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*||**||||||||||||||| targets:246   AAAAACUAUGUAUCUAGAAAA   266 Target Full Sequence	2.0	PREDICTED: Zea mays inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2-like (LOC103651148), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT086175.2	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*|||*||||*|||||||||| targets:1593   AUAAGGUAUGCAUCUAGAAAA   1613 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0125C17 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008662493.2	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*||*|||||||||||*|||| targets:1440   AUAAUUUAUGUAUCUAAAAAA   1460 Target Full Sequence	2.5	PREDICTED: Zea mays probable WRKY transcription factor 53 (LOC103639781), mRNA	NA	coding protein	psRNATarget
BT039099.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*||**||||||||||||||| targets:940   AAAAACUAUGUAUCUAGAAAA   960 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0370L15 mRNA, complete cds	NA	coding protein	psRNATarget
BT086732.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*|||**|||||||||||||| targets:3   AAAAGCAAUGUAUCUAGAAAA   23 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0242L12 mRNA, complete cds	NA	coding protein	psRNATarget
EZ061464.1	ncRNA:21   UCUUCAAUACAUAGAUCUUUU   1   |*|||*||||*|||||||||| targets:291   AAAAGCUAUGCAUCUAGAAAA   311 Target Full Sequence	2.5	TSA: Zea mays contig62586, mRNA sequence	NA	coding protein	psRNATarget