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BaseInfo

ncRNA ID	novel_zma_miR14302
Species	Zea mays
Class	miRNA
Genome position	Chr2:145681387-145681441 [+]
Reference genome	RefGen_v4
Source	SRR2089700;SRR2089704
Length	24
Mature sequence(if miRNA)	1 - GCGCCAGGUCGCGGAUCGUCCGGC - 24
Stem-loop(if miRNA)	--    C   U       C     G UCC   GCGC AGG CGCGGAU GUCCG C   U   |||| ||| ||||||| ||||| |   CGUG UCC GCGCCUG CAGGC G   G GA    -   -       C     - CCA
Stem-loop sequence	GCGCCAGGUCGCGGAUCGUCCGGCUCCUGACCGCGGACCGUCCGCGCCUGUGCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ104830.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||| targets:44   GCCGGACGGUCCGCGACCUGGCGC   67 Target Full Sequence	1.0	TSA: Zea mays contig40487, mRNA sequence	NA	coding protein	psRNATarget
EZ099059.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||| targets:29   GCCGGACGGUCCGCGACCUGGCGC   52 Target Full Sequence	1.0	TSA: Zea mays contig34714, mRNA sequence	NA	coding protein	psRNATarget
BT061906.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||| targets:214   GCCGGACGGUCCGCGACCUGGCGC   237 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0196M13 mRNA, complete cds	NA	coding protein	psRNATarget
EU971146.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||| targets:350   GCCGGACGGUCCGCGACCUGGCGC   373 Target Full Sequence	1.0	Zea mays clone 358377 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU968855.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||| targets:651   GCCGGACGGUCCGCGACCUGGCGC   674 Target Full Sequence	1.0	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
EU968855.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||=|| targets:722   GCCGGACGGUCCGCGACCUGGUGC   745 Target Full Sequence	2.5	Zea mays clone 324570 mRNA sequence	NA	coding protein	psRNATarget
BT034345.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||| targets:686   GCCGGACGGUCCGCGACCUGGCGC   709 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0009F02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020540955.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=||||||||||||||= targets:949   GCCGGACGGUCCGCGACCUGGCGU   972 Target Full Sequence	2.0	PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC103632613), transcript variant X5, mRNA	NA	coding protein	psRNATarget
NM_001175289.1	ncRNA:24   CG-GCCUGCUAGGCGCUGGACCGCG   1   ||-||||||=||||||||||||||| targets:1681   GCGCGGACGGUCCGCGACCUGGCGC   1705 Target Full Sequence	1.0	Zea mays uncharacterized LOC100382557 (LOC100382557), mRNA	NA	coding protein	psRNATarget
BT064749.1	ncRNA:24   CG-GCCUGCUAGGCGCUGGACCGCG   1   ||-||||||=||||||||||||||| targets:1681   GCGCGGACGGUCCGCGACCUGGCGC   1705 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0101G18 mRNA, complete cds	NA	coding protein	psRNATarget
LQ241925.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   |||*||||=||||||||||||||| targets:41   GCCAGACGGUCCGCGACCUGGCGC   64 Target Full Sequence	1.0	Sequence 7920 from Patent EP2985353	NA	coding protein	psRNATarget
HI409795.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   |||*||||=||||||||||||||| targets:41   GCCAGACGGUCCGCGACCUGGCGC   64 Target Full Sequence	1.0	Sequence 7920 from Patent EP2074227	NA	coding protein	psRNATarget
JB170256.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   |||*||||=||||||||||||||| targets:41   GCCAGACGGUCCGCGACCUGGCGC   64 Target Full Sequence	1.0	Sequence 7920 from Patent EP2559767	NA	coding protein	psRNATarget
NM_001310588.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=|||||||||||*||| targets:1371   GCCGGACGGUCCGCGACCUGACGC   1394 Target Full Sequence	2.5	Zea mays uncharacterized LOC100272476 (IDP716), mRNA	NA	coding protein	psRNATarget
BT038788.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   ||||||||=|||||||||||*||| targets:1453   GCCGGACGGUCCGCGACCUGACGC   1476 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0325P03 mRNA, complete cds	NA	coding protein	psRNATarget
EU952231.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   |||*||||=||||||||||||||| targets:450   GCCAGACGGUCCGCGACCUGGCGC   473 Target Full Sequence	1.0	Zea mays clone 1234152 mRNA sequence	NA	coding protein	psRNATarget
EZ049111.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   **||||||=||||||||||||||| targets:25   UGCGGACGGUCCGCGACCUGGCGC   48 Target Full Sequence	1.0	TSA: Zea mays contig50229, mRNA sequence	NA	coding protein	psRNATarget
AY104522.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   *|||*=||||*||||||||||||| targets:183   ACCGCGCGAUGCGCGACCUGGCGC   206 Target Full Sequence	2.0	Zea mays PCO077650 mRNA sequence	NA	coding protein	psRNATarget
EU957743.1	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   *|||*=||||*||||||||||||| targets:189   ACCGCGCGAUGCGCGACCUGGCGC   212 Target Full Sequence	2.0	Zea mays clone 1613544 cytochrome P450 CYP71Y10 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008650824.2	ncRNA:24   CGGCCUGCUAGGCGCUGGACCGCG   1   *|||*=||||*||||||||||||| targets:362   ACCGCGCGAUGCGCGACCUGGCGC   385 Target Full Sequence	2.0	PREDICTED: Zea mays premnaspirodiene oxygenase (LOC103629711), mRNA	NA	coding protein	psRNATarget