ncRNA ID | novel_zma_miR14295 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:43251546-43251625 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089700;SRR2089701;SRR2089705 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGCCGUUCGAGGCUAGGUCGGG - 22 |
Stem-loop(if miRNA) |
--    --U   -     AU       A  UC    UUC   GC   CGAU   GCC CGGGC  GGUGAUG CG  GUCC   GGA  G   ||||   ||| |||||  ||||||| ||  ||||   |||  G   GCUG   CGG GCUUG  CCGCUGC GC  CAGG   CCU  A GG    GAU   A     --       -  --    -CU   AG |
Stem-loop sequence | CGAUUGCCCGGGCAUGGUGAUGACGUCGUCCUUCGGAGCGGAGAUCCUCGGACCGCGUCGCCGUUCGAGGCUAGGUCGGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020549149.1 |
|
2.5 | PREDICTED: Zea mays PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like (LOC109944397), mRNA | NA | coding protein | psRNATarget | |||||||||
HI409975.1 |
|
1.5 | Sequence 8100 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
LQ242105.1 |
|
1.5 | Sequence 8100 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
JB170436.1 |
|
1.5 | Sequence 8100 from Patent EP2559767 | NA | coding protein | psRNATarget |