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BaseInfo

ncRNA ID novel_zma_miR14295
Species Zea mays
Class miRNA
Genome position Chr2:43251546-43251625 [-]
Reference genome RefGen_v4
Source SRR2089700;SRR2089701;SRR2089705
Length 22
Mature sequence(if miRNA) 1 - CGCCGUUCGAGGCUAGGUCGGG - 22
Stem-loop(if miRNA) --    --U   -     AU       A  UC    UUC   GC
  CGAU   GCC CGGGC  GGUGAUG CG  GUCC   GGA  G
  ||||   ||| |||||  ||||||| ||  ||||   |||  G
  GCUG   CGG GCUUG  CCGCUGC GC  CAGG   CCU  A
GG    GAU   A     --       -  --    -CU   AG
Stem-loop sequence CGAUUGCCCGGGCAUGGUGAUGACGUCGUCCUUCGGAGCGGAGAUCCUCGGACCGCGUCGCCGUUCGAGGCUAGGUCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020549149.1
ncRNA:22   GGGCUGGAUCGGAGCUUGCCGC   1
  =|||=||||||||||=||||||
targets:110   UCCGGCCUAGCCUCGGACGGCG   131

2.5 PREDICTED: Zea mays PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like (LOC109944397), mRNA NA coding protein psRNATarget
HI409975.1
ncRNA:22   GGGCUGGAUCGGAGCUUGCCGC   1
  *=|||||||||||||=||||||
targets:1   GUCGACCUAGCCUCGGACGGCG   22

1.5 Sequence 8100 from Patent EP2074227 NA coding protein psRNATarget
LQ242105.1
ncRNA:22   GGGCUGGAUCGGAGCUUGCCGC   1
  *=|||||||||||||=||||||
targets:1   GUCGACCUAGCCUCGGACGGCG   22

1.5 Sequence 8100 from Patent EP2985353 NA coding protein psRNATarget
JB170436.1
ncRNA:22   GGGCUGGAUCGGAGCUUGCCGC   1
  *=|||||||||||||=||||||
targets:1   GUCGACCUAGCCUCGGACGGCG   22

1.5 Sequence 8100 from Patent EP2559767 NA coding protein psRNATarget