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BaseInfo

ncRNA ID	osa-miRf11026-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - AGUGGCAGUGGCAGUUGCAGUU - NA
Stem-loop(if miRNA)	C        --CA        G     U   G      -----------   GCAGAAAUCUUGU AGCU AAAGCUGC    GCCACUGU GCUGU CAC GGUCAA           GCA             A |||| ||||||||    |||||||| ||||| ||| ||||||           |||             A UUGA UUUUGACG    CGGUGACG UGACG GUG CCAGUU           CCG             C     C        UUGA        G     -   A      AACGAGUUUUG   GAAUCGGUGUUGU
Stem-loop sequence	AGCUCAAAGCUGCCAGCCACUGUGGCUGUUCACGGGUCAAGCAGCAGAAAUCUUGUAACUGUUGUGGCUAAGGCCGUUUUGAGCAAUUGACCAGUGGCAGUGGCAGUGGCAGUUGCAGUUUUCAGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK065874.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   |||||||||||||||||||||| targets:1575   AACUGCAACUGCCACUGCCACU   1596 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013050J04, full insert sequence	NA	coding protein	psRNATarget
XM_015787866.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   |||||||||||||||||||||| targets:1603   AACUGCAACUGCCACUGCCACU   1624 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4341921 (LOC4341921), transcript variant X2, mRNA	uncharacterized LOC4341921(LOC4341921)	coding protein	psRNATarget
XM_015792726.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   *=||||*||||||||||||||| targets:93   CGCUGCCACUGCCACUGCCACU   114 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345949 (LOC4345949), mRNA	uncharacterized LOC4345949(LOC4345949)	coding protein	psRNATarget
BT131979.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   ==||||*=|||||||||||||| targets:514   GGCUGCUGCUGCCACUGCCACU   535 Target Full Sequence	2.0	Oryza sativa clone RRlibD00367 mRNA sequence	NA	coding protein	psRNATarget
AK109789.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   ==||||*||||||||||||=|| targets:134   GGCUGCCACUGCCACUGCCGCU   155 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-147-D05, full insert sequence	NA	coding protein	psRNATarget
AK111970.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   *=||||*=|||||||||||||| targets:7   UGCUGCUGCUGCCACUGCCACU   28 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:006-302-C09, full insert sequence	NA	coding protein	psRNATarget
XM_015791877.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   *=||||*=|||||||||||||| targets:55   UGCUGCUGCUGCCACUGCCACU   76 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (LOC4343820), mRNA	PLASMODESMATA CALLOSE-BINDING PROTEIN 3(LOC4343820)	coding protein	psRNATarget
CT827974.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   |*||||*=|||||||||||||| targets:5   AUCUGCUGCUGCCACUGCCACU   26 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN051D08, full insert sequence	NA	coding protein	psRNATarget
CT827973.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   |*||||*=|||||||||||||| targets:34   AUCUGCUGCUGCCACUGCCACU   55 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA021O20, full insert sequence	NA	coding protein	psRNATarget
AK110282.1	ncRNA:22   UUGACGUUGACGGUGACGGUGA   1   *=||||*||||||||||||||* targets:2427   CGCUGCCACUGCCACUGCCACA   2448 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:002-163-E06, full insert sequence	NA	coding protein	psRNATarget