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BaseInfo

ncRNA ID novel_zma_miR14268
Species Zea mays
Class miRNA
Genome position Chr9:21436026-21436118 [+]
Reference genome RefGen_v4
Source SRR2089700
Length 24
Mature sequence(if miRNA) 1 - AUUGAAGGGGAUAGGAGGGGCUAA - 24
Stem-loop(if miRNA) -AUUGAA      A           C   C          C    U
       GGGGAU GGAGGGGCUAA AUC CCUUCUUAUU AAAU U
       |||||| ||||||||||| ||| |||||||||| ||||
       UCCCUA UCUCCUCGAUU UAG GGAAGAAUAA UUUA U
UUUUGCC      A           U   A          A    A
Stem-loop sequence AUUGAAGGGGAUAGGAGGGGCUAACAUCCCCUUCUUAUUCAAAUUUUAAUUUAAAUAAGAAGGAGAUUUUAGCUCCUCUAAUCCCUCCGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ069159.1
ncRNA:24   AAUCGGGGAGGAUAGGGGAAGUUA   1
  ||--||=||||*||||||||||||
targets:57   UU--CCUCUCCAAUCCCCUUCAAU   78

2.5 TSA: Zea mays contig04794, mRNA sequence NA coding protein psRNATarget
EZ111591.1
ncRNA:24   AAUCGGGGAGGAUAGGGGAAGUUA   1
  ||--||=||||*||||||||||||
targets:73   UU--CCUCUCCCAUCCCCUUCAAU   94

2.5 TSA: Zea mays contig47252, mRNA sequence NA coding protein psRNATarget