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BaseInfo

ncRNA ID novel_zma_miR14263
Species Zea mays
Class miRNA
Genome position Chr8:128896313-128896400 [+]
Reference genome RefGen_v4
Source SRR2089700;SRR2089704;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - ACCGGAGAGAAUUGGAGGGGCUAA - 24
Stem-loop(if miRNA) --A        AAU                             A
   CCGGAGAG   UGGAGGGGCUAAAUUCUCCUUCUUAUUCA U
   ||||||||   |||||||||||||||||||||||||||||
   GGCCUCUC   ACCUCCCCGAUUUAAGAGGAAGAAUAAGU U
UUG        CUU                             U
Stem-loop sequence ACCGGAGAGAAUUGGAGGGGCUAAAUUCUCCUUCUUAUUCAAUUUUGAAUAAGAAGGAGAAUUUAGCCCCUCCAUUCCUCUCCGGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163850.1
ncRNA:24   AAUCGGGGAGGUUAAGAGAGGCCA   1
  ||||||||||||||||*||||||*
targets:73   UUAGCCCCUCCAAUUCCCUCCGGG   96

2.5 Sequence 1514 from Patent EP2559767 NA coding protein psRNATarget
HI403389.1
ncRNA:24   AAUCGGGGAGGUUAAGAGAGGCCA   1
  ||||||||||||||||*||||||*
targets:73   UUAGCCCCUCCAAUUCCCUCCGGG   96

2.5 Sequence 1514 from Patent EP2074227 NA coding protein psRNATarget
LQ235519.1
ncRNA:24   AAUCGGGGAGGUUAAGAGAGGCCA   1
  ||||||||||||||||*||||||*
targets:73   UUAGCCCCUCCAAUUCCCUCCGGG   96

2.5 Sequence 1514 from Patent EP2985353 NA coding protein psRNATarget
EU957568.1
ncRNA:24   AAUCGGGGAGGUUAAGAGAGGCCA   1
  |||||*|*||||||||||||||||
targets:914   UUAGCGCAUCCAAUUCUCUCCGGU   937

2.0 Zea mays clone 1597470 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008664337.2
ncRNA:24   AAUCGGGGAGGUUAAGAGAGGCCA   1
  *||*=|=|||||||*|||||||||
targets:2083   CUAUUCUCUCCAAUCCUCUCCGGU   2106

2.5 PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA NA coding protein psRNATarget