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BaseInfo

ncRNA ID	osa-miRf11023-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - GUUGGUGUCACCAACCGGGACUA - NA
Stem-loop(if miRNA)	A        C                 UU  -   --  -   UGA  GACUACUGA UCCC GUUGGUGU ACCAACCGGGACUAAAG  UC UCA  GC CCC   CA         C |||| |||||||| |||||||||||||||||  || |||  || |||   || AGGG CAACCACA UGGUUGGCCCUGAUUUU  AG AGU  UG GGG   CC         A     C        A                 -U  U   AA  A   ---  AAAUAGGGC
Stem-loop sequence	UCCCAGUUGGUGUCACCAACCGGGACUAAAGUUUCUCAGCCCCUGACAGACUACUGACACGGGAUAAACCGGGAGUAAUGAUGAUUUUUAGUCCCGGUUGGUAACACCAACCGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242216.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||||||||||||*|||||||| targets:664   UAGUCCCGGUUGGUAACACCAAC   686 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||||||||||||*|||||||| targets:1706   UAGUCCCGGUUGGUAACACCAAC   1728 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK289098.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||||||||||||*|||||||| targets:244   UAGUCCCGGUUGGUAACACCAAC   266 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288463.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   |||||||||||||||*||||||| targets:561   UAGUCCCGGUUGGUGUCACCAAC   583 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090036E20, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||||||||||||*|||||||| targets:1849   UAGUCCCGGUUGGUAACACCAAC   1871 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||||||||||||*|||||||| targets:53   UAGUCCCGGUUGGUAACACCAAC   75 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK121472.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||=|||||||||*|||||||| targets:2066   UAGUUCCGGUUGGUAACACCAAC   2088 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK288624.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||||||=|||||||*|||||||| targets:5002   UAGUCCUGGUUGGUAACACCAAC   5024 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK121178.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   *|||||=|||||||*|||||||| targets:1941   AAGUCCUGGUUGGUAACACCAAC   1963 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   |||*||||||||||*|||||||| targets:1317   UAGCCCCGGUUGGUAACACCAAC   1339 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK119354.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||*|||=|||||||*|||||||| targets:71   UAAUCCUGGUUGGUAACACCAAC   93 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015792800.1	ncRNA:23   AUCAGGGCCAACCACUGUGGUUG   1   ||*|||=|||||||*|||||||| targets:680   UAAUCCUGGUUGGUAACACCAAC   702 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA	uncharacterized LOC4346359(LOC4346359)	coding protein	psRNATarget