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BaseInfo

ncRNA ID	novel_zma_miR14258
Species	Zea mays
Class	miRNA
Genome position	Chr1:17306137-17306262 [+]
Reference genome	RefGen_v4
Source	SRR2089700
Length	22
Mature sequence(if miRNA)	1 - AAUGAUUGUGUAAUGUGUUGGC - 22
Stem-loop(if miRNA)	--    A       A     U   UAUCACUU     -        U    -AAUUGCCAU   AAG  A   AAUG UUGUGUA UGUGU GGC        UCUCC AAAUAUGU GCAU          AUC   UC A   |||| ||||||| ||||| |||        ||||| |||||||| ||||          |||   || U   UUAU AACACAU ACACA CCG        AGGGG UUUAUACA CGUA          UAG   AG A AU    G       -     -   --------     A        -    CUCAAAACAC   --A  U
Stem-loop sequence	AAUGAUUGUGUAAUGUGUUGGCUAUCACUUUCUCCAAAUAUGUUGCAUAAUUGCCAUAUCAAGUCAAUAUGAAGAUCACAAAACUCAUGCACAUAUUUAGGGGAGCCACACAUACACAAGUAUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT063045.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:60   GCAAACACUUUACAAAAUCAUU   81 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0019E13 mRNA, complete cds	NA	coding protein	psRNATarget
BT067141.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:117   GCAAACACUUUACAAAAUCAUU   138 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0210M19 mRNA, complete cds	NA	coding protein	psRNATarget
BT064445.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:116   GCAAACACUUUACAAAAUCAUU   137 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0169H13 mRNA, complete cds	NA	coding protein	psRNATarget
BT065635.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:71   GCAAACACUUUACAAAAUCAUU   92 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0374K03 mRNA, complete cds	NA	coding protein	psRNATarget
BT064719.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:40   GCAAACACUUUACAAAAUCAUU   61 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0061E10 mRNA, complete cds	NA	coding protein	psRNATarget
BT083483.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:40   GCAAACACUUUACAAAAUCAUU   61 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0002I11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196574.1	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:115   GCAAACACUUUACAAAAUCAUU   136 Target Full Sequence	2.5	Zea mays uncharacterized LOC100501954 (LOC100501954), mRNA	NA	coding protein	psRNATarget
BT086697.2	ncRNA:22   CGGUUGUGUAAUGUGUUAGUAA   1   ||*|||||*|||||*||||||| targets:115   GCAAACACUUUACAAAAUCAUU   136 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0037O06 mRNA, complete cds	NA	coding protein	psRNATarget