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BaseInfo

ncRNA ID novel_zma_miR14256
Species Zea mays
Class miRNA
Genome position Chr8:10367682-10367766 [-]
Reference genome RefGen_v4
Source SRR2089700
Length 24
Mature sequence(if miRNA) 62 - AACGGUGCUGCGUCAGGGGGUUUU - 85
Stem-loop(if miRNA) --       C  C        -     -A      AUUUUU    A
  AACGGUG UG GUCAGGGG GUUUU  UAAAAU      UGCA C
  ||||||| || |||||||| |||||  ||||||      ||||
  UUGCCAC AC CAGUCCCC CAAAA  AUUUUA      AUGU U
GG       A  A        U     AC      -----C    C
Stem-loop sequence AACGGUGCUGCGUCAGGGGGUUUUAUAAAAUAUUUUUUGCAACUCUGUACAUUUUACAAAAACUCCCCUGACACAACACCGUUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020539811.1
ncRNA:24   UUUUGGGGGACUGCGUCGUGGCAA   1
  ||||||||||||||||||||||||
targets:1656   AAAACCCCCUGACGCAGCACCGUU   1679

0.0 PREDICTED: Zea mays anthocyanidin 3-O-glucoside 6''-O-acyltransferase (LOC103631128), mRNA NA coding protein psRNATarget
XM_008681149.2
ncRNA:24   UUUUGGGGGACUGCGUCGUGGCAA   1
  |||||||||||||*||||||||||
targets:665   AAAACCCCCUGACACAGCACCGUU   688

1.5 PREDICTED: Zea mays mini zinc finger protein 1 (LOC103654311), mRNA NA coding protein psRNATarget
XM_008660409.2
ncRNA:24   UUUUGGGGGACUGCGUCGUGGCAA   1
  |||||||||||||*||||||||||
targets:1341   AAAACCCCCUGACACAGCACCGUU   1364

1.5 PREDICTED: Zea mays homeodomain-leucine zipper transcription factor TaHDZipI-1 (LOC100282963), transcript variant X1, mRNA NA coding protein psRNATarget