Search result

BaseInfo

ncRNA ID novel_zma_miR14251
Species Zea mays
Class miRNA
Genome position Chr1:198213697-198213783 [+]
Reference genome RefGen_v4
Source SRR2089700
Length 24
Mature sequence(if miRNA) 64 - ACAAAAUAUUUGUAGUGUGGACGG - 87
Stem-loop(if miRNA) --       A      AUA      C       G     CACC
  GUCCGCA UACAAA   UUUGUA UGUGGAC GUCCG    U
  ||||||| ||||||   |||||| ||||||| |||||    G
  CAGGUGU AUGUUU   AAACAU ACGCCUG CAGGU    G
GG       G      AUA      A       G     CCCA
Stem-loop sequence GUCCGCAAUACAAAAUAUUUGUACUGUGGACGGUCCGCACCUGGACCCUGGACGGUCCGCAAUACAAAAUAUUUGUAGUGUGGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020546066.1
ncRNA:24   GGCAGGUGUG-AUGUUUAUAAAACA   1
  =*|*=||||=-||||||||||||||
targets:1988   UAGAUCACAUGUACAAAUAUUUUGU   2012

3.0 PREDICTED: Zea mays probable apyrase 3 (LOC103640688), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546065.1
ncRNA:24   GGCAGGUGUG-AUGUUUAUAAAACA   1
  =*|*=||||=-||||||||||||||
targets:2118   UAGAUCACAUGUACAAAUAUUUUGU   2142

3.0 PREDICTED: Zea mays probable apyrase 3 (LOC103640688), transcript variant X1, mRNA NA coding protein psRNATarget