Search result

BaseInfo

ncRNA ID	novel_zma_miR14249
Species	Zea mays
Class	miRNA
Genome position	Chr8:126700965-126701011 [-]
Reference genome	RefGen_v4
Source	SRR2089700
Length	21
Mature sequence(if miRNA)	27 - UUUUGGGCACUCGGCAAAGAA - 47
Stem-loop(if miRNA)	-     ---              A  UUUUG   GGCACUCGGCAAAG A  |||||   |||||||||||||| G  AAAAC   CCGUGAGCUGUUUC C A     GAA              U
Stem-loop sequence	UUUUGGGCACUCGGCAAAGAAGCUCUUUGUCGAGUGCCAAGCAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055423.1	ncRNA:21   AAGAAACGGCUCACGGGUUUU   1   |||||||||||||||||=||| targets:145   UUCUUUGCCGAGUGCCCGAAA   165 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:21   AAGAAACGGCUCACGGGUUUU   1   |||||||||||||||||=||| targets:145   UUCUUUGCCGAGUGCCCGAAA   165 Target Full Sequence	1.5	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:21   AAGAAACGGCUCACGGGUUUU   1   |||||||||||||||||=||| targets:2164   UUCUUUGCCGAGUGCCCGAAA   2184 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:21   AAGAAACGGCUCACGGGUUUU   1   |||||||||||||||||=||| targets:2164   UUCUUUGCCGAGUGCCCGAAA   2184 Target Full Sequence	1.5	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
XM_020543430.1	ncRNA:21   AAGAAACGGCUCACGGGUUUU   1   *||||||||||||||||=||| targets:1177   CUCUUUGCCGAGUGCCCGAAA   1197 Target Full Sequence	1.5	PREDICTED: Zea mays protein enabled homolog (LOC103636633), mRNA	NA	coding protein	psRNATarget