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BaseInfo

ncRNA ID	novel_zma_miR14246
Species	Zea mays
Class	miRNA
Genome position	Chr8:179755077-179755130 [-]
Reference genome	RefGen_v4
Source	SRR2089700;SRR2089703
Length	24
Mature sequence(if miRNA)	31 - GGUCCGCGGCCUGGUGCGAGACGC - 54
Stem-loop(if miRNA)	--G      GG   G    -    -   G    GUCCGC  CCU GUGC GAGA CGC G    ||||||  ||| |||| |||| |||    CAGGCG  GGG CACG CUCU GUG C UAG      --   A    U    C   G
Stem-loop sequence	GGUCCGCGGCCUGGUGCGAGACGCGGCGGUGCUCUCUGCACAGGGGCGGACGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT088349.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   |||*|||||||||||||||||||| targets:1306   GCGCCUCGCACCAGGCCGCGGACC   1329 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
BT088349.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   ||--|*|||||||||||||||||| targets:1235   GC--CGCGCACCAGGCCGCGGACC   1256 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   |||*|||||||||||||||||||| targets:1306   GCGCCUCGCACCAGGCCGCGGACC   1329 Target Full Sequence	0.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   ||--|*|||||||||||||||||| targets:1235   GC--CGCGCACCAGGCCGCGGACC   1256 Target Full Sequence	1.0	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   |||*|||||||||||||||||||| targets:2749   GCGCCUCGCACCAGGCCGCGGACC   2772 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget
BT055966.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   |||*||*|||*||||||||||||* targets:414   GCGACUGGCAGCAGGCCGCGGACA   437 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0073H21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153228.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   |||*||*|||*||||||||||||* targets:414   GCGACUGGCAGCAGGCCGCGGACA   437 Target Full Sequence	3.0	Zea mays Serine carboxypeptidase-like 51 (LOC100280301), mRNA	NA	coding protein	psRNATarget
EZ073491.1	ncRNA:24   CGCAGAGCGUGGUCCGGCGCCUGG   1   *=|||**||*|||||||||||||| targets:81   CUGUCCGGCCCCAGGCCGCGGACC   104 Target Full Sequence	3.0	TSA: Zea mays contig09128, mRNA sequence	NA	coding protein	psRNATarget