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BaseInfo

ncRNA ID	novel_zma_miR14245
Species	Zea mays
Class	miRNA
Genome position	Chr1:186375011-186375074 [+]
Reference genome	RefGen_v4
Source	SRR2089700
Length	24
Mature sequence(if miRNA)	41 - AUAAGGAAUAAGGUGGUGAUGGAU - 64
Stem-loop(if miRNA)	--     UAU    -        C   -     A   CCAUU   CCAU UUAUUUCU AUA UUAGU C   |||||   |||| |||||||| ||| |||||   GGUAG   GGUG AAUAAGGA UAU AAUCA U UA     --U    G        A   U     A
Stem-loop sequence	CCAUUUAUCCAUUUAUUUCUCAUAUUAGUACUAACUAAUUAUAAGGAAUAAGGUGGUGAUGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664497.2	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   ||||||||=||||||||||||||| targets:171   AUCCAUCAUCACCUUAUUCCUUAU   194 Target Full Sequence	1.0	PREDICTED: Zea mays F-box protein SKIP19 (LOC103641127), mRNA	NA	coding protein	psRNATarget
LQ238264.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||||||||||||*|||||||||| targets:59   AUCCAUCACCACCCUAUUCCUUAU   82 Target Full Sequence	1.5	Sequence 4259 from Patent EP2985353	NA	coding protein	psRNATarget
JB166595.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||||||||||||*|||||||||| targets:59   AUCCAUCACCACCCUAUUCCUUAU   82 Target Full Sequence	1.5	Sequence 4259 from Patent EP2559767	NA	coding protein	psRNATarget
HI406134.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||||||||||||*|||||||||| targets:59   AUCCAUCACCACCCUAUUCCUUAU   82 Target Full Sequence	1.5	Sequence 4259 from Patent EP2074227	NA	coding protein	psRNATarget
BT068564.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   ||||||||||||||*||||||||| targets:131   AUCCAUCACCACCUCAUUCCUUAU   154 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0327N20 mRNA, complete cds	NA	coding protein	psRNATarget
BT054365.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   ||||||||||||*||||||||||| targets:1230   AUCCAUCACCACAUUAUUCCUUAU   1253 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0002L04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152506.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   ||||||||||||*||||||||||| targets:1230   AUCCAUCACCACAUUAUUCCUUAU   1253 Target Full Sequence	1.5	Zea mays OSJNBb0091E11.19-like protein (LOC100279506), mRNA	NA	coding protein	psRNATarget
BT068011.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||=|||||||||||||||||*|| targets:1209   AUCUAUCACCACCUUAUUCCUCAU   1232 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0019K20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020542382.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   ||||||||=|||||*||||||||| targets:1197   AUCCAUCAUCACCUCAUUCCUUAU   1220 Target Full Sequence	2.5	PREDICTED: Zea mays deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog (LOC103634732), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549921.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||=|||||||||||||||||*|| targets:2250   AUCUAUCACCACCUUAUUCCUCAU   2273 Target Full Sequence	1.5	PREDICTED: Zea mays putative histone-lysine N-methyltransferase family protein (LOC100383674), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001319048.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||=|||||||||||||||||*|| targets:2312   AUCUAUCACCACCUUAUUCCUCAU   2335 Target Full Sequence	1.5	Zea mays putative histone-lysine N-methyltransferase family protein (LOC100383674), mRNA	NA	coding protein	psRNATarget
XM_020547325.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||=|||||||||||||||||*|| targets:1110   AUCUAUCACCACCUUAUUCCUCAU   1133 Target Full Sequence	1.5	PREDICTED: Zea mays transcription factor MYB31 (myb31), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547324.1	ncRNA:24   UAGGUAGUGGUGGAAUAAGGAAUA   1   |||=|||||||||||||||||*|| targets:1111   AUCUAUCACCACCUUAUUCCUCAU   1134 Target Full Sequence	1.5	PREDICTED: Zea mays transcription factor MYB31 (myb31), transcript variant X1, mRNA	NA	coding protein	psRNATarget