Search result

BaseInfo

ncRNA ID novel_zma_miR14244
Species Zea mays
Class miRNA
Genome position Chr8:150531616-150531688 [+]
Reference genome RefGen_v4
Source SRR2089700
Length 23
Mature sequence(if miRNA) 51 - AAGGGCGGACUGUCCGCGGCCUA - 73
Stem-loop(if miRNA) -     --           GG   G    -   -    G
 GGGCC  GGACGGUCCGC  CCU GUGC GAG GCGC G
 |||||  |||||||||||  ||| |||| ||| ||||
 UCCGG  CCUGUCAGGCG  GGA CGCG CUC CGUG U
A     CG           --   A    U   U    G
Stem-loop sequence GGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGGUGCUCUCUGCGCAAGGGCGGACUGUCCGCGGCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001196968.1
ncRNA:23   AUCCGGCGCCUGUCAGGCGGGAA   1
  *||||||||||||||||||||*|
targets:1266   CAGGCCGCGGACAGUCCGCCCCU   1288

1.5 Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA NA coding protein psRNATarget
BT088349.1
ncRNA:23   AUCCGGCGCCUGUCAGGCGGGAA   1
  *||||||||||||||||||||*|
targets:1266   CAGGCCGCGGACAGUCCGCCCCU   1288

1.5 Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds NA coding protein psRNATarget
XM_020539115.1
ncRNA:23   AUCCGGCGCCUGUCAGGCGGGAA   1
  *||||||||||||||||||||*|
targets:2709   CAGGCCGCGGACAGUCCGCCCCU   2731

1.5 PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA NA coding protein psRNATarget