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BaseInfo

ncRNA ID	osa-miRf11020-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UUAUUCCCGGUUGGUGUUACC - NA
Stem-loop(if miRNA)	AAUCA   UU  UCCCGGUUUAUCCCG AUGAUCUUUAUUCCCGGUUGGUGUUACCAACCGGGACUAAA     UCA  AC               U |||||||||||||||||||||||||||||||||||||||||     |||  ||               G UACUAGAAAUGAGGGUCAACCACAGUGGUUGGCCCUGAUUU     AGU  GG               U                                          CAAAG   -C  GGACUGUCUGAUGAC
Stem-loop sequence	AUGAUCUUUAUUCCCGGUUGGUGUUACCAACCGGGACUAAAAAUCAUCAUUACUCCCGGUUUAUCCCGUGUCAGUAGUCUGUCAGGGGCUGAGAAACUUUAGUCCCGGUUGGUGACACCAACUGGGAGUAAAGAUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK121472.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   ||||||||||||||||||||| targets:2077   GGUAACACCAACCGGGAAUAA   2097 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
AK242216.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   |||||||||||||||||=||| targets:675   GGUAACACCAACCGGGAGUAA   695 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
XM_015758676.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   *||||||||||||||||=||| targets:1995   AGUAACACCAACCGGGAGUAA   2015 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group polyubiquitin-like (LOC107279205), mRNA	polyubiquitin-like(LOC107279205)	coding protein	psRNATarget
AK288438.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   |||||||||||||||||*||| targets:1328   GGUAACACCAACCGGGACUAA   1348 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   ||||||*||||||||||*||| targets:2380   GGUAACUCCAACCGGGACUAA   2400 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   |*|*|||||||||||||*||| targets:1439   GUUUACACCAACCGGGACUAA   1459 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   |||||||||||||||||*||| targets:64   GGUAACACCAACCGGGACUAA   84 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK061057.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   |||||=|||||||||||*||| targets:370   GGUAAUACCAACCGGGACUAA   390 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-205-H07, full insert sequence	NA	coding protein	psRNATarget
AK288424.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   |||||=|||||||||||*||| targets:1386   GGUAAUACCAACCGGGACUAA   1406 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
XM_015779829.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   ||*||||||||||||||*||| targets:1761   GGGAACACCAACCGGGACUAA   1781 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4335182 (LOC4335182), mRNA	uncharacterized LOC4335182(LOC4335182)	coding protein	psRNATarget
AK288895.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   **|*|||||||||||||*||| targets:3625   UUUUACACCAACCGGGACUAA   3645 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090080F08, full insert sequence	NA	coding protein	psRNATarget
XM_015767715.1	ncRNA:21   CCAUUGUGGUUGGCCCUUAUU   1   **|*|||||||||||||*||| targets:3119   UUUUACACCAACCGGGACUAA   3139 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group chaperone protein ClpB1-like (LOC107276891), mRNA	chaperone protein ClpB1-like(LOC107276891)	coding protein	psRNATarget