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BaseInfo

ncRNA ID novel_zma_miR14226
Species Zea mays
Class miRNA
Genome position Chr6:171517484-171517593 [+]
Reference genome RefGen_v4
Source SRR2089700
Length 23
Mature sequence(if miRNA) 88 - ACCGGACUGUCUGGUGUAGCACU - 110
Stem-loop(if miRNA) U    --        U  A     ----CA   GGGAGAUCAACUCCAAACUUGCCA
 GUGC  CACCGGAC GU CGGUG      CCA                        C
 ||||  |||||||| || |||||      |||
 CACG  GUGGUCUG CA GCCAC      UCG                        C
U    AU        U  G     UUAAUA   CCUCACCGAGGGUCUUAAGGGCUU
Stem-loop sequence UGUGCCACCGGACUGUACGGUGCACCAGGGAGAUCAACUCCAAACUUGCCACCUUCGGGAAUUCUGGGAGCCACUCCGCUAUAAUUCACCGGACUGUCUGGUGUAGCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069074.2
ncRNA:23   UCACGAUGUGGUCUGUCAGGCCA   1
  =|||||*||||=|||||||||||
targets:681   GGUGCUUCACCGGACAGUCCGGU   703

2.5 Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds NA coding protein psRNATarget
JB170466.1
ncRNA:23   UCACGAUGUGGUCUGUCAGGCCA   1
  ||||**=||||||||||||||||
targets:4   AGUGGCGCACCAGACAGUCCGGU   26

3.0 Sequence 8130 from Patent EP2559767 NA coding protein psRNATarget
LQ242135.1
ncRNA:23   UCACGAUGUGGUCUGUCAGGCCA   1
  ||||**=||||||||||||||||
targets:4   AGUGGCGCACCAGACAGUCCGGU   26

3.0 Sequence 8130 from Patent EP2985353 NA coding protein psRNATarget
HI410005.1
ncRNA:23   UCACGAUGUGGUCUGUCAGGCCA   1
  ||||**=||||||||||||||||
targets:4   AGUGGCGCACCAGACAGUCCGGU   26

3.0 Sequence 8130 from Patent EP2074227 NA coding protein psRNATarget
BT066461.2
ncRNA:23   UCACGAUGUGGUCUGUCAGGCCA   1
  =||||**||||||||||||||||
targets:726   GGUGCACCACCAGACAGUCCGGU   748

2.0 Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds NA coding protein psRNATarget
BT066461.2
ncRNA:23   UCACGAUGUGGUCUGUCAGGCCA   1
  =|||**=||||||||||||||||
targets:484   GGUGGCGCACCAGACAGUCCGGU   506

3.0 Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds NA coding protein psRNATarget