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BaseInfo

ncRNA ID novel_zma_miR14219
Species Zea mays
Class miRNA
Genome position Chr5:21950596-21950743 [-]
Reference genome RefGen_v4
Source SRR2089700
Length 24
Mature sequence(if miRNA) 1 - AGCACACCACCAAAACUAAGGACA - 24
Stem-loop(if miRNA) --C                                   A           -              C   ---   U
   UCUUAGUUUUGGUGGUGUGCUCACCUAUACCCUUA UCGUGUUUUUU GCUUAGCUGUGCCC UCU   GUU U
   ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||   |||
   GGAAUCAAAACCACCACACGAGUGGAUAUGGGAAU AGUACAAAAAA CGAGUCGACACGGG AGG   CGA A
ACA                                   C           A              A   UCA   U
Stem-loop sequence CUCUUAGUUUUGGUGGUGUGCUCACCUAUACCCUUAAUCGUGUUUUUUGCUUAGCUGUGCCCCUCUGUUUUAUAGCACUGGAAGGGCACAGCUGAGCAAAAAAACAUGACUAAGGGUAUAGGUGAGCACACCACCAAAACUAAGGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ076008.1
ncRNA:24   ACAGGAAUCAAAACCACCACACGA   1
  ||||=|||||||||||||||||||
targets:18   UGUCUUUAGUUUUGGUGGUGUGCU   41

0.0 TSA: Zea mays contig11645, mRNA sequence NA coding protein psRNATarget
BT036033.2
ncRNA:24   ACAGGAAUCAAAACCACCACACGA   1
  ||*|||||||||||||||||||||
targets:851   UGCCCUUAGUUUUGGUGGUGUGCU   874

0.0 Zea mays full-length cDNA clone ZM_BFb0092L19 mRNA, complete cds NA coding protein psRNATarget
NM_001138790.2
ncRNA:24   ACAGGAAUCAAAACCACCACACGA   1
  ||*|||||||||||||||||||||
targets:851   UGCCCUUAGUUUUGGUGGUGUGCU   874

0.0 Zea mays uncharacterized LOC100193698 (LOC100193698), mRNA NA coding protein psRNATarget