ncRNA ID | novel_zma_miR14219 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:21950596-21950743 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089700 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCACACCACCAAAACUAAGGACA - 24 |
Stem-loop(if miRNA) |
--C                                   A           -              C   ---   U    UCUUAGUUUUGGUGGUGUGCUCACCUAUACCCUUA UCGUGUUUUUU GCUUAGCUGUGCCC UCU   GUU U    ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||   |||    GGAAUCAAAACCACCACACGAGUGGAUAUGGGAAU AGUACAAAAAA CGAGUCGACACGGG AGG   CGA A ACA                                   C           A              A   UCA   U |
Stem-loop sequence | CUCUUAGUUUUGGUGGUGUGCUCACCUAUACCCUUAAUCGUGUUUUUUGCUUAGCUGUGCCCCUCUGUUUUAUAGCACUGGAAGGGCACAGCUGAGCAAAAAAACAUGACUAAGGGUAUAGGUGAGCACACCACCAAAACUAAGGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ076008.1 |
|
0.0 | TSA: Zea mays contig11645, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT036033.2 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFb0092L19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001138790.2 |
|
0.0 | Zea mays uncharacterized LOC100193698 (LOC100193698), mRNA | NA | coding protein | psRNATarget |