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BaseInfo

ncRNA ID novel_zma_miR14215
Species Zea mays
Class miRNA
Genome position Chr10:123081391-123081515 [+]
Reference genome RefGen_v4
Source SRR2089700;SRR2089707
Length 24
Mature sequence(if miRNA) 102 - AGUUGAUCGCCACCUGUAUAGGUU - 125
Stem-loop(if miRNA) --  -     U     UGU      GCU  U   C     U  GUAUAU   GUUGCUUCGGCC
  CC AUGCA GUGGU   UUAACU   GA UUG UCCGC AC      UGG            C
  || ||||| |||||   ||||||   || ||| ||||| ||      |||            C
  GG UAUGU CACCG   AGUUGA   CU AAC AGGUG UG      CUG            A
UU  A     C     -CU      AUU  C   C     U  --AGCC   UACAGUAGUCUC
Stem-loop sequence CCAUGCAUGUGGUUGUUUAACUGCUGAUUUGCUCCGCUACGUAUAUUGGGUUGCUUCGGCCCCACUCUGAUGACAUGUCCCGAGUUGUGGACCAACUCUUAAGUUGAUCGCCACCUGUAUAGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT042251.1
ncRNA:24   UUGGAUAUGUCCACCGCUAGUUGA   1
  ||||||||*|||||||||||||||
targets:678   AACCUAUAAAGGUGGCGAUCAACU   701

1.0 Zea mays full-length cDNA clone ZM_BFb0179K22 mRNA, complete cds NA coding protein psRNATarget