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BaseInfo

ncRNA ID	novel_zma_miR14204
Species	Zea mays
Class	miRNA
Genome position	Chr8:149327577-149327715 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	24
Mature sequence(if miRNA)	116 - ACUAUUAAGACGGUAAGGGGUAGG - 139
Stem-loop(if miRNA)	------UAC      AAC       A            UU   UGU    ---A   G  -   U    -AC     A          UAUUGU   CUUAAUA GUAGUAGAGAUA  GUC   UCGU    GAU UA GUA UAGG   UUGUA A          ||||||   ||||||| ||||||||||||  |||   ||||    ||| || ||| ||||   |||||          AUGGCA   GAAUUAU CAUCAUUUCUAU  CGG   AGCA    UUA AU CGU AUCC   AACGU U GGAUGGGGA      ---       -            --   --U    AAAG   G  U   C    AUC     G
Stem-loop sequence	UACUAUUGUAACCUUAAUAAGUAGUAGAGAUAUUGUCUGUUCGUAGAUGUAGUAUUAGGACUUGUAAAUGUGCAACUACCUACUGCUUAGAUUGAAAACGAUGGCUAUCUUUACUACUAUUAAGACGGUAAGGGGUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547954.1	ncRNA:24   GGAUGGGGAAUGGCAGAAUUAUCA   1   |||||||||||||||||||||||* targets:343   CCUACCCCUUACCGUCUUAAUAGG   366 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273810 (LOC100273810), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547953.1	ncRNA:24   GGAUGGGGAAUGGCAGAAUUAUCA   1   |||||||||||||||||||||||* targets:343   CCUACCCCUUACCGUCUUAAUAGG   366 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC100273810 (LOC100273810), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT064372.2	ncRNA:24   GGAUGGGGAAUGGCAGAAUUAUCA   1   |*|||||||||||*|||||||||| targets:6   CAUACCCCUUACCUUCUUAAUAGU   29 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0162P15 mRNA, complete cds	NA	coding protein	psRNATarget
EU949957.1	ncRNA:24   GGAUGGGGAAUGGCAGAAUUAUCA   1   ||||*||||||||*|||||||||* targets:400   CCUAACCCUUACCAUCUUAAUAGG   423 Target Full Sequence	2.5	Zea mays clone 454723 mRNA sequence	NA	coding protein	psRNATarget