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BaseInfo

ncRNA ID	novel_zma_miR14199
Species	Zea mays
Class	miRNA
Genome position	Chr4:48421372-48421596 [-]
Reference genome	RefGen_v4
Source	SRR2089700
Length	24
Mature sequence(if miRNA)	1 - UAACCCUUUGAGCACCAGAUACGU - 24
Stem-loop(if miRNA)	--                   G                                               UC       CCA         AC    -------AA              GUAUCUGGUGCUCAAAGGG UACGGUGCUCAUGUGCACAUUUUAAAUCUGGUGCAUCCAUUUUGCAU  AACGGCA   GCUAAUUUU  GAAG         CACCUUCCUCCC   ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||   |||||||||  ||||         |||||||||||G   CAUAGACCACGAGUUUCCC AUGCCACGAGUAUAUGUGUAAAAUUUAGACCACGUAGGUAGAAUGUA  UUGUCGU   UGGUUAAAA  CUUC         GUGGAAGGAGGU UG                   A                                               GA       -CG         CA    GUGGGGAAG
Stem-loop sequence	GUAUCUGGUGCUCAAAGGGGUACGGUGCUCAUGUGCACAUUUUAAAUCUGGUGCAUCCAUUUUGCAUUCAACGGCACCAGCUAAUUUUACGAAGAACACCUUCCUCCCGUGGAGGAAGGUGGAAGGGGUGCUUCACAAAAUUGGUGCUGCUGUUAGAUGUAAGAUGGAUGCACCAGAUUUAAAAUGUGUAUAUGAGCACCGUAACCCUUUGAGCACCAGAUACGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT062061.1	ncRNA:24   UGCAUAGACCACGAGUUUCCCAAU   1   |||||||||||||||||||||*|| targets:194   ACGUAUCUGGUGCUCAAAGGGGUA   217 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0211A21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001350153.2	ncRNA:24   UGCAUAGACCACGAGUUUCCCAAU   1   |||||||||||||||||||||*|| targets:194   ACGUAUCUGGUGCUCAAAGGGGUA   217 Target Full Sequence	1.5	Zea mays uncharacterized LOC100275401 (LOC100275401), mRNA	NA	coding protein	psRNATarget
XM_008661793.2	ncRNA:24   UGCAUAGACCACGAGUUUCCCAAU   1   ||*||||||||||||||||||*|| targets:875   ACAUAUCUGGUGCUCAAAGGGGUA   898 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008661794.2	ncRNA:24   UGCAUAGACCACGAGUUUCCCAAU   1   ||*||||||||||||||||||*|| targets:884   ACAUAUCUGGUGCUCAAAGGGGUA   907 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103639018 (LOC103639018), transcript variant X2, mRNA	NA	coding protein	psRNATarget