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BaseInfo

ncRNA ID novel_zma_miR14197
Species Zea mays
Class miRNA
Genome position Chr4:56511831-56511894 [-]
Reference genome RefGen_v4
Source SRR2089700
Length 24
Mature sequence(if miRNA) 1 - GGCCGUGGCUUGUGGUAGAUCGGA - 24
Stem-loop(if miRNA) --A   -       C  -   C     C    GG
   GAU UGCCACA GC GCG GCCGC GGCC  G
   ||| ||||||| || ||| ||||| ||||
   CUA AUGGUGU CG UGC CGGUG CCGG  C
AGG   G       U  G   -     -    GC
Stem-loop sequence AGAUUGCCACACGCGCGCGCCGCCGGCCGGGCCGGGCCGUGGCCGUGGCUUGUGGUAGAUCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067810.1
ncRNA:24   AGGCUAGAU-GGUGUUCGGUGCCGG   1
  *=**||||=-|||||||||||||||
targets:978   GUGUAUCUGGCCACAAGCCACGGCC   1002

3.0 Zea mays full-length cDNA clone ZM_BFc0166D05 mRNA, complete cds NA coding protein psRNATarget
XM_020551420.1
ncRNA:24   AGGCUAGAU-GGUGUUCGGUGCCGG   1
  *=**||||=-|||||||||||||||
targets:1061   GUGUAUCUGGCCACAAGCCACGGCC   1085

3.0 PREDICTED: Zea mays uncharacterized LOC100276194 (LOC100276194), transcript variant X1, mRNA NA coding protein psRNATarget