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BaseInfo

ncRNA ID novel_zma_miR14195
Species Zea mays
Class miRNA
Genome position Chr4:82718616-82718680 [-]
Reference genome RefGen_v4
Source SRR2089700
Length 24
Mature sequence(if miRNA) 1 - GCUUCUUUGUCGAGUGUUGUGGCC - 24
Stem-loop(if miRNA) ---  A                 GCAC   U G
   CA AGCACUCGGCAAAGAAG    ACC G G
   || |||||||||||||||||    ||| |
   GU UUGUGAGCUGUUUCUUC    UGG C A
CCG  G                 GAAA   C A
Stem-loop sequence CAAAGCACUCGGCAAAGAAGGCACACCUGGGAACCGGUAAAGCUUCUUUGUCGAGUGUUGUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406639.1
ncRNA:24   CCGGUGUUGUGAGCUGUUUCUUCG   1
  **===|||||||||=||||||||=
targets:36   CCUUGCAACACUCGGCAAAGAAGU   59

2.5 Sequence 4764 from Patent EP2074227 NA coding protein psRNATarget
JB167100.1
ncRNA:24   CCGGUGUUGUGAGCUGUUUCUUCG   1
  **===|||||||||=||||||||=
targets:36   CCUUGCAACACUCGGCAAAGAAGU   59

2.5 Sequence 4764 from Patent EP2559767 NA coding protein psRNATarget
LQ238769.1
ncRNA:24   CCGGUGUUGUGAGCUGUUUCUUCG   1
  **===|||||||||=||||||||=
targets:36   CCUUGCAACACUCGGCAAAGAAGU   59

2.5 Sequence 4764 from Patent EP2985353 NA coding protein psRNATarget
EU951420.1
ncRNA:24   CCGGUGUUGUGAGCUGUUUCUUCG   1
  *|===*||||||||=|||||||||
targets:152   AGUUGGAACACUCGGCAAAGAAGC   175

2.5 Zea mays clone 701735 mRNA sequence NA coding protein psRNATarget
EZ101998.1
ncRNA:24   CCGGUGUUGUGAGCUGUUUCUUCG   1
  |**==|||||||||||||||||*=
targets:8   GAGUGCAACACUCGACAAAGAACU   31

2.5 TSA: Zea mays contig37654, mRNA sequence NA coding protein psRNATarget