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BaseInfo

ncRNA ID	novel_zma_miR14194
Species	Zea mays
Class	miRNA
Genome position	Chr4:126650106-126650199 [-]
Reference genome	RefGen_v4
Source	SRR2089700
Length	24
Mature sequence(if miRNA)	1 - AGACAAAGUGUGACAAGUUAGGCA - 24
Stem-loop(if miRNA)	--A      G  G             A  UUAGUCACCUAAAUUGAAG    CUAAUU UG CACACUUUGUCUA GG                   A    |||||| || ||||||||||||| ||    GAUUGA AC GUGUGAAACAGAU UG                   A ACG      -  A             -  AAAAAGACCGAUACCAACC
Stem-loop sequence	ACUAAUUGUGGCACACUUUGUCUAAGGUUAGUCACCUAAAUUGAAGAACCAACCAUAGCCAGAAAAAGUUAGACAAAGUGUGACAAGUUAGGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163747.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |||||||||||||||||||||*|| targets:19   UGCCUAACUUGUCACACUUUGCCU   42 Target Full Sequence	1.5	Sequence 1411 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235416.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |||||||||||||||||||||*|| targets:19   UGCCUAACUUGUCACACUUUGCCU   42 Target Full Sequence	1.5	Sequence 1411 from Patent EP2985353	NA	coding protein	psRNATarget
HI403286.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |||||||||||||||||||||*|| targets:19   UGCCUAACUUGUCACACUUUGCCU   42 Target Full Sequence	1.5	Sequence 1411 from Patent EP2074227	NA	coding protein	psRNATarget
JB163745.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |||||||*||||||=||||||||| targets:19   UGCCUAAAUUGUCAUACUUUGUCU   42 Target Full Sequence	2.5	Sequence 1409 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235414.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |||||||*||||||=||||||||| targets:19   UGCCUAAAUUGUCAUACUUUGUCU   42 Target Full Sequence	2.5	Sequence 1409 from Patent EP2985353	NA	coding protein	psRNATarget
HI403284.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |||||||*||||||=||||||||| targets:19   UGCCUAAAUUGUCAUACUUUGUCU   42 Target Full Sequence	2.5	Sequence 1409 from Patent EP2074227	NA	coding protein	psRNATarget
XM_008660020.2	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   ||=||||||||*|||||||||||| targets:3008   UGUCUAACUUGCCACACUUUGUCU   3031 Target Full Sequence	1.5	PREDICTED: Zea mays THO complex subunit 4B (si946052g10b), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008660021.2	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   ||=||||||||*|||||||||||| targets:3136   UGUCUAACUUGCCACACUUUGUCU   3159 Target Full Sequence	1.5	PREDICTED: Zea mays THO complex subunit 4B (si946052g10b), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020543539.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   ||=||||||||*|||||||||||| targets:3143   UGUCUAACUUGCCACACUUUGUCU   3166 Target Full Sequence	1.5	PREDICTED: Zea mays THO complex subunit 4B (si946052g10b), transcript variant X6, mRNA	NA	coding protein	psRNATarget
EU958119.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |*|||||||||||||||||||*|| targets:933   UACCUAACUUGUCACACUUUGCCU   956 Target Full Sequence	1.5	Zea mays clone 1674247 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001149797.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |*|||||||||||||||||||*|| targets:933   UACCUAACUUGUCACACUUUGCCU   956 Target Full Sequence	1.5	Zea mays CASP-like protein Os12g0568700 (LOC103650532), mRNA	NA	coding protein	psRNATarget
JB163829.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   ||=|||||||*||||||||||*|| targets:19   UGUCUAACUUAUCACACUUUGCCU   42 Target Full Sequence	2.5	Sequence 1493 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235498.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   ||=|||||||*||||||||||*|| targets:19   UGUCUAACUUAUCACACUUUGCCU   42 Target Full Sequence	2.5	Sequence 1493 from Patent EP2985353	NA	coding protein	psRNATarget
HI403368.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   ||=|||||||*||||||||||*|| targets:19   UGUCUAACUUAUCACACUUUGCCU   42 Target Full Sequence	2.5	Sequence 1493 from Patent EP2074227	NA	coding protein	psRNATarget
NM_001346844.1	ncRNA:24   ACGGAUUGAACAGUGUGAAACAGA   1   |*|||*|*|||||||||||||||* targets:1497   UACCUUAGUUGUCACACUUUGUCC   1520 Target Full Sequence	3.0	Zea mays protein ASPARTIC PROTEASE IN GUARD CELL 2-like (LOC103636276), mRNA	NA	coding protein	psRNATarget