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BaseInfo

ncRNA ID novel_zma_miR14189
Species Zea mays
Class miRNA
Genome position Chr4:187045050-187045099 [-]
Reference genome RefGen_v4
Source SRR2089699
Length 24
Mature sequence(if miRNA) 1 - UGUUCUCUGGUCAGGCGCGGACGG - 24
Stem-loop(if miRNA) --       A      GU    -  G
  GUCCGUG CCUGGC  GAGG CG C
  ||||||| ||||||  |||| ||
  CAGGCGC GGACUG  CUCU GU A
GG       -      GU    U  G
Stem-loop sequence GUCCGUGACCUGGCGUGAGGCGGCAGUGUUCUCUGGUCAGGCGCGGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ096610.1
ncRNA:24   GGCAGGCGCGGACUGGUCUCUUGU   1
  |||||||||=|||||||||||=||
targets:27   CCGUCCGCGUCUGACCAGAGAGCA   50

2.5 TSA: Zea mays contig32265, mRNA sequence NA coding protein psRNATarget