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BaseInfo

ncRNA ID novel_zma_miR14169
Species Zea mays
Class miRNA
Genome position Chr10:56455216-56455296 [+]
Reference genome RefGen_v4
Source SRR2089699
Length 24
Mature sequence(if miRNA) 58 - GGACUUAUUUUCGGCGGCUUCUGG - 81
Stem-loop(if miRNA) --    A  A           -   AAAA   A        
  AGAA CC CCGAAAAUAAG CCU    CUG CGAAAAUAG
  |||| || ||||||||||| |||    ||| ||||||||C
  UCUU GG GGCUUUUAUUC GGA    GGC GCUUUUAUU
GG    C  C           A   -AAC   G        
Stem-loop sequence AGAAACCACCGAAAAUAAGCCUAAAACUGACGAAAAUAGCUUAUUUUCGGCGGCAAAGGACUUAUUUUCGGCGGCUUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167665.1
ncRNA:24   GGUCUUCGGCGGCUUUUAUUCAGG   1
  |||*|||||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

1.5 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget
HI407204.1
ncRNA:24   GGUCUUCGGCGGCUUUUAUUCAGG   1
  |||*|||||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

1.5 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
LQ239334.1
ncRNA:24   GGUCUUCGGCGGCUUUUAUUCAGG   1
  |||*|||||||||||||||||*||
targets:3   CCAAAAGCCGCCGAAAAUAAGGCC   26

1.5 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget