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BaseInfo

ncRNA ID novel_zma_miR14166
Species Zea mays
Class miRNA
Genome position Chr3:223439385-223439503 [-]
Reference genome RefGen_v4
Source SRR2089699
Length 24
Mature sequence(if miRNA) 1 - AAUAGAAUUAAGUGGAGCGACUAA - 24
Stem-loop(if miRNA) --    C  A         UC         UA              G            
  AGUC CU UACUUAAUU  AUUUUAGUU  UAAAUUGUUAAAUA GGAAACUAAAAUA
  |||| || |||||||||  |||||||||  |||||||||||||| ||||||||||||G
  UCAG GA GUGAAUUAA  UAAAAUUAG  AUUUAAUGAUUUAU UCUUUGAUUUUGA
AA    C  G         GA         GG              A            
Stem-loop sequence AGUCCCUAUACUUAAUUUCAUUUUAGUUUAUAAAUUGUUAAAUAGGGAAACUAAAAUAGAGUUUUAGUUUCUAUAUUUAGUAAUUUAGGGAUUAAAAUAGAAUUAAGUGGAGCGACUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT085047.1
ncRNA:24   AAUCAGCGAGGUGAAUUAAGAUAA   1
  ||||||*|||||||||||||||||
targets:1218   UUAGUCCCUCCACUUAAUUCUAUU   1241

1.0 Zea mays full-length cDNA clone ZM_BFb0232J05 mRNA, complete cds NA coding protein psRNATarget